RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 GGTA1PQ4G0N0 100 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 SFRP5Q5T4F7 317 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 MROH9Q5TGP6 573 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 LIPNQ5VXI9 398 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 HBMQ6B0K9 141 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 LYPD4Q6UWN0 246 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 ESPNLQ6ZVH7 1005 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.01□□□□□ -1.13
VPS11-203ENST00000529545 CCDC25Q86WR0 208 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 ZNF619Q8N2I2 560 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 CEP112Q8N8E3 955 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 KBTBD8Q8NFY9 601 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 OR2V1Q8NHB1 315 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 PIWIL2Q8TC59 973 aaKnown RBP8.01□□□□□ -1.13
VPS11-203ENST00000529545 NEUROG1Q92886 237 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 KISS1RQ969F8 398 aaPredicted RBP8.01□□□□□ -1.13
VPS11-203ENST00000529545 PHF21BQ96EK2 531 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 BBS4Q96RK4 519 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 SHCBP1LQ9BZQ2 653 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 TRIM2Q9C040 744 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 C3orf14Q9HBI5 128 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 TIGARQ9NQ88 270 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 FARSBQ9NSD9 589 aaKnown RBP8.01□□□□□ -1.13
VPS11-203ENST00000529545 VPS29Q9UBQ0 182 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 MCM8Q9UJA3 840 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 VDAC3Q9Y277 283 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 PCNX3Q9H6A9 2034 aa8□□□□□ -1.13
VPS11-203ENST00000529545 IGLV3-32A0A0A0MS00 114 aa8□□□□□ -1.13
VPS11-203ENST00000529545 SHISA8B8ZZ34 492 aa8□□□□□ -1.13
VPS11-203ENST00000529545 STX16-NPEPL1H3BU86 382 aa8□□□□□ -1.13
VPS11-203ENST00000529545 STX16O14662 325 aa8□□□□□ -1.13
VPS11-203ENST00000529545 TNFSF11O14788 317 aa8□□□□□ -1.13
VPS11-203ENST00000529545 ADAMDEC1O15204 470 aa8□□□□□ -1.13
VPS11-203ENST00000529545 LMX1BO60663 402 aa8□□□□□ -1.13
VPS11-203ENST00000529545 GCM2O75603 506 aaPredicted RBP8□□□□□ -1.13
VPS11-203ENST00000529545 SLITRK5O94991 958 aa8□□□□□ -1.13
VPS11-203ENST00000529545 IL33O95760 270 aa8□□□□□ -1.13
VPS11-203ENST00000529545 ANGPTL1O95841 491 aa8□□□□□ -1.13
VPS11-203ENST00000529545 OPN1LWP04000 364 aa8□□□□□ -1.13
VPS11-203ENST00000529545 IL3P08700 152 aa8□□□□□ -1.13
VPS11-203ENST00000529545 RBP1P09455 135 aa8□□□□□ -1.13
VPS11-203ENST00000529545 HNF1AP20823 631 aa8□□□□□ -1.13
VPS11-203ENST00000529545 TYK2P29597 1187 aa8□□□□□ -1.13
VPS11-203ENST00000529545 PAFAH1B1P43034 410 aa8□□□□□ -1.13
VPS11-203ENST00000529545 CDH11P55287 796 aa8□□□□□ -1.13
VPS11-203ENST00000529545 CARD18P57730 90 aa8□□□□□ -1.13
VPS11-203ENST00000529545 RAC1P63000 192 aa8□□□□□ -1.13
VPS11-203ENST00000529545 PSG6Q00889 435 aa8□□□□□ -1.13
VPS11-203ENST00000529545 TRAF3Q13114 568 aa8□□□□□ -1.13
VPS11-203ENST00000529545 P2RY6Q15077 328 aa8□□□□□ -1.13
VPS11-203ENST00000529545 RAB35Q15286 201 aa8□□□□□ -1.13
VPS11-203ENST00000529545 RNPS1Q15287 305 aaKnown RBP8□□□□□ -1.13
VPS11-203ENST00000529545 TMEM44Q2T9K0 475 aa8□□□□□ -1.13
VPS11-203ENST00000529545 SSX8Q7RTT4 187 aa8□□□□□ -1.13
VPS11-203ENST00000529545 GALNT10Q86SR1 603 aa8□□□□□ -1.13
VPS11-203ENST00000529545 DTX2Q86UW9 622 aa8□□□□□ -1.13
VPS11-203ENST00000529545 GABRG1Q8N1C3 465 aa8□□□□□ -1.13
VPS11-203ENST00000529545 GTPBP8Q8N3Z3 284 aaPredicted RBP8□□□□□ -1.13
VPS11-203ENST00000529545 CDYL2Q8N8U2 506 aa8□□□□□ -1.13
VPS11-203ENST00000529545 BANPQ8N9N5 519 aa8□□□□□ -1.13
VPS11-203ENST00000529545 OR7G2Q8NG99 324 aa8□□□□□ -1.13
VPS11-203ENST00000529545 OR10H5Q8NGA6 315 aa8□□□□□ -1.13
VPS11-203ENST00000529545 OR4F6Q8NGB9 312 aa8□□□□□ -1.13
VPS11-203ENST00000529545 FBF1Q8TES7 1133 aa8□□□□□ -1.13
VPS11-203ENST00000529545 ROBO4Q8WZ75 1007 aa8□□□□□ -1.13
VPS11-203ENST00000529545 OSTF1Q92882 214 aa8□□□□□ -1.13
VPS11-203ENST00000529545 ZBTB8AQ96BR9 441 aa8□□□□□ -1.13
VPS11-203ENST00000529545 MUCL1Q96DR8 90 aa8□□□□□ -1.13
VPS11-203ENST00000529545 POTEKPQ9BYX7 375 aa8□□□□□ -1.13
VPS11-203ENST00000529545 VPS11Q9H270 941 aa8□□□□□ -1.13
VPS11-203ENST00000529545 L2HGDHQ9H9P8 463 aa8□□□□□ -1.13
VPS11-203ENST00000529545 SLC35C2Q9NQQ7 365 aa8□□□□□ -1.13
VPS11-203ENST00000529545 FLRT3Q9NZU0 649 aa8□□□□□ -1.13
VPS11-203ENST00000529545 PCTPQ9UKL6 214 aa8□□□□□ -1.13
VPS11-203ENST00000529545 B3GALT5Q9Y2C3 310 aa8□□□□□ -1.13
VPS11-203ENST00000529545 A0A087WV62 115 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 DPRXA6NFQ7 191 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 ELOA3DA6NLF2 546 aaPredicted RBP7.99□□□□□ -1.13
VPS11-203ENST00000529545 ZSCAN12O43309 604 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 PCDH7O60245 1069 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 KCNH1O95259 989 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 UTS2O95399 124 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 ADAP00813 363 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 CD8AP01732 235 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 KRT6AP02538 564 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 KRT6BP04259 564 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 HSD3B1P14060 373 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 HSD3B2P26439 372 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 KRT6CP48668 564 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 GZMKP49863 264 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 SERPINB8P50452 374 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 ZNF41P51814 821 aaPredicted RBP7.99□□□□□ -1.13
VPS11-203ENST00000529545 C21orf58P58505 322 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 PRR5P85299 388 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 RUNX1T1Q06455 604 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 CSTF3Q12996 717 aaKnown RBP7.99□□□□□ -1.13
VPS11-203ENST00000529545 ITGADQ13349 1161 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 PPA1Q15181 289 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 TSC22D1Q15714 1073 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 STK11Q15831 433 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms