RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 UGT2B10P36537 528 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 STAT5AP42229 794 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 MASP1P48740 699 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 MAN2A2P49641 1150 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 ENTPD1P49961 510 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 RAB38P57729 211 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 TLE1Q04724 770 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 CHRNEQ04844 493 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 ST3GAL4Q11206 333 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 FOXD4Q12950 439 aaPredicted RBP10.94□□□□□ -0.66
USF1-208ENST00000528768 PIN1Q13526 163 aaPredicted RBP10.94□□□□□ -0.66
USF1-208ENST00000528768 FZD2Q14332 565 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 NCF4Q15080 339 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 CTF1Q16619 201 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 OCLNQ16625 522 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 ZSWIM7Q19AV6 140 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 ZNF750Q32MQ0 723 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 KLHL22Q53GT1 634 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 ENTPD8Q5MY95 495 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 TMEM201Q5SNT2 666 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 PLAG1Q6DJT9 500 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 C1orf94Q6P1W5 598 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 Q6ZPB1 254 aaPredicted RBP10.94□□□□□ -0.66
USF1-208ENST00000528768 PLEKHM3Q6ZWE6 761 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 USP43Q70EL4 1123 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 RANBP3LQ86VV4 465 aaPredicted RBP10.94□□□□□ -0.66
USF1-208ENST00000528768 OR4K5Q8NGD3 323 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 TEX47Q8TBZ9 253 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 SLC9A6Q92581 669 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 UBE2FQ969M7 185 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 ZHX1-C8orf76Q96EF9 292 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 STACQ99469 402 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 FUZQ9BT04 418 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 SLC38A1Q9H2H9 487 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 UCK1Q9HA47 277 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 CHCHD3Q9NX63 227 aaKnown RBP10.94□□□□□ -0.66
USF1-208ENST00000528768 REV1Q9UBZ9 1251 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 AASSQ9UDR5 926 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 C19orf53Q9UNZ5 99 aaPredicted RBP10.94□□□□□ -0.66
USF1-208ENST00000528768 ERGIC3Q9Y282 383 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 B3GNT3Q9Y2A9 372 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 WDR45Q9Y484 360 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 HYKKA2RU49 373 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 CLEC18AA5D8T8 446 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 WASHC1A8K0Z3 465 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 EFCAB9A8MZ26 197 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 CLDN25C9JDP6 229 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 P2RX6O15547 441 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 AIREO43918 545 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 PLOD3O60568 738 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 SRPX2O60687 465 aaPredicted RBP10.93□□□□□ -0.66
USF1-208ENST00000528768 GALR3O60755 368 aaPredicted RBP10.93□□□□□ -0.66
USF1-208ENST00000528768 STX11O75558 287 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 NADKO95544 446 aaPredicted RBP10.93□□□□□ -0.66
USF1-208ENST00000528768 ZBTB11O95625 1053 aaPredicted RBP10.93□□□□□ -0.66
USF1-208ENST00000528768 ATP1B1P05026 303 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 STSP08842 583 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 ZNF12P17014 697 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 CSTF2P33240 577 aaKnown RBP eCLIP10.93□□□□□ -0.66
USF1-208ENST00000528768 STT3AP46977 705 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 EIF3IQ13347 325 aaKnown RBP10.93□□□□□ -0.66
USF1-208ENST00000528768 C1DQ13901 141 aaKnown RBP10.93□□□□□ -0.66
USF1-208ENST00000528768 SPCS2Q15005 226 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 SEC23BQ15437 767 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 ZNHIT3Q15649 155 aaPredicted RBP10.93□□□□□ -0.66
USF1-208ENST00000528768 LTB4RQ15722 352 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 DECR1Q16698 335 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 SLC25A30Q5SVS4 291 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 RNLSQ5VYX0 342 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 CLEC18BQ6UXF7 455 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 ZNF730Q6ZMV8 503 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 ZNF438Q7Z4V0 828 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 RBM45Q8IUH3 476 aaKnown RBP10.93□□□□□ -0.66
USF1-208ENST00000528768 CCDC103Q8IW40 242 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 SLC22A18ASQ8N1D0 253 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 SDR16C5Q8N3Y7 309 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 ZSCAN1Q8NBB4 408 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 CLEC18CQ8NCF0 446 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 C7orf57Q8NEG2 295 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 B3GNT7Q8NFL0 401 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 OR7G2Q8NG99 324 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 OR4D11Q8NGI4 311 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 OR6T1Q8NGN1 323 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 IFI44Q8TCB0 444 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 SLC7A13Q8TCU3 470 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 OSTF1Q92882 214 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 LGALS12Q96DT0 336 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 GIMAP5Q96F15 307 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 SLC35A4Q96G79 324 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 VMP1Q96GC9 406 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 TMEM80Q96HE8 168 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 FCRL4Q96PJ5 515 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 CSF3RQ99062 836 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 POLDIP3Q9BY77 421 aaKnown RBP10.93□□□□□ -0.66
USF1-208ENST00000528768 SLC25A18Q9H1K4 315 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 SLC25A19Q9HC21 320 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 DUSP22Q9NRW4 184 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 GPR27Q9NS67 375 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 C14orf105Q9NVL8 296 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms