RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 CHRNB4P30926 498 aa12.16□□□□□ -0.46
CAPN1-215ENST00000528396 ZNF41P51814 821 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-215ENST00000528396 CASP9P55211 416 aa12.16□□□□□ -0.46
CAPN1-215ENST00000528396 NUP107P57740 925 aa12.16□□□□□ -0.46
CAPN1-215ENST00000528396 PHC1P78364 1004 aa12.16□□□□□ -0.46
CAPN1-215ENST00000528396 SRYQ05066 204 aa12.16□□□□□ -0.46
CAPN1-215ENST00000528396 ZNF630Q2M218 657 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-215ENST00000528396 TIGD2Q4W5G0 525 aa12.16□□□□□ -0.46
CAPN1-215ENST00000528396 NHSL2Q5HYW2 709 aa12.16□□□□□ -0.46
CAPN1-215ENST00000528396 C6orf10Q5SRN2 563 aa12.16□□□□□ -0.46
CAPN1-215ENST00000528396 TNFAIP8L2Q6P589 184 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-215ENST00000528396 DNAJC14Q6Y2X3 702 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-215ENST00000528396 CHMP1BQ7LBR1 199 aa12.16□□□□□ -0.46
CAPN1-215ENST00000528396 FADS6Q8N9I5 356 aa12.16□□□□□ -0.46
CAPN1-215ENST00000528396 OR2M3Q8NG83 312 aa12.16□□□□□ -0.46
CAPN1-215ENST00000528396 PHOSPHO1Q8TCT1 267 aa12.16□□□□□ -0.46
CAPN1-215ENST00000528396 XAGE5Q8WWM1 108 aa12.16□□□□□ -0.46
CAPN1-215ENST00000528396 NTNG2Q96CW9 530 aa12.16□□□□□ -0.46
CAPN1-215ENST00000528396 NEURL3Q96EH8 262 aa12.16□□□□□ -0.46
CAPN1-215ENST00000528396 SH3YL1Q96HL8 342 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-215ENST00000528396 ITCHQ96J02 903 aa12.16□□□□□ -0.46
CAPN1-215ENST00000528396 TTYH2Q9BSA4 534 aa12.16□□□□□ -0.46
CAPN1-215ENST00000528396 CCDC28BQ9BUN5 200 aa12.16□□□□□ -0.46
CAPN1-215ENST00000528396 OR51I1Q9H343 314 aa12.16□□□□□ -0.46
CAPN1-215ENST00000528396 MED4Q9NPJ6 270 aa12.16□□□□□ -0.46
CAPN1-215ENST00000528396 FBXO34Q9NWN3 711 aa12.16□□□□□ -0.46
CAPN1-215ENST00000528396 MRPS18CQ9Y3D5 142 aaKnown RBP12.16□□□□□ -0.46
CAPN1-215ENST00000528396 HRH3Q9Y5N1 445 aa12.16□□□□□ -0.46
CAPN1-215ENST00000528396 KLF2Q9Y5W3 355 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-215ENST00000528396 FREM3P0C091 2139 aa12.16□□□□□ -0.46
CAPN1-215ENST00000528396 NOTCH2Q04721 2471 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 FAM234BA2RU67 622 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 C17orf51A8MQB3 221 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 HCRTR2O43614 444 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 SCN2BO60939 215 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 STX11O75558 287 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 KRT75O95678 551 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 NUDT14O95848 222 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 GSNP06396 782 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 OR12D1P0DN82 309 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 GLI4P10075 376 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 POU3F2P20265 443 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-215ENST00000528396 MSX1P28360 303 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 HTR1EP28566 365 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 IL12AP29459 219 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 DCTP40126 519 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 EXOSC6Q5RKV6 272 aaKnown RBP12.15□□□□□ -0.46
CAPN1-215ENST00000528396 SAXO2Q658L1 398 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 ZAR1Q86SH2 424 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 RPRMLQ8N4K4 120 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 GOT1L1Q8NHS2 421 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-215ENST00000528396 C1GALT1C1Q96EU7 318 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 THOC1Q96FV9 657 aaKnown RBP12.15□□□□□ -0.46
CAPN1-215ENST00000528396 TRIB1Q96RU8 372 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 EBF4Q9BQW3 602 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 PIGQQ9BRB3 760 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 SIKE1Q9BRV8 207 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 INPP5KQ9BT40 448 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 PRDM14Q9GZV8 571 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 NPHS2Q9NP85 383 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 CHST11Q9NPF2 352 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 STOML1Q9UBI4 398 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 DCTN4Q9UJW0 460 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 TRIM33Q9UPN9 1127 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 RNF6Q9Y252 685 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 FAM215AQ9Y5M1 114 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 KCNE3Q9Y6H6 103 aa12.15□□□□□ -0.46
CAPN1-215ENST00000528396 A0A087WZY1 265 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 NPIPA5A0A0B4J1W7 369 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 A0A1W2PQD3 144 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 NPIPA7E9PJI5 369 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 LINC01387J3KSC0 135 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 NPIPA8P0DM63 369 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 NCF2P19878 526 aaPredicted RBP12.14□□□□□ -0.47
CAPN1-215ENST00000528396 CHMP24386 653 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 COL8A1P27658 744 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 ATP12AP54707 1039 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 IRX1P78414 480 aaPredicted RBP12.14□□□□□ -0.47
CAPN1-215ENST00000528396 TXNL4AP83876 142 aaKnown RBP12.14□□□□□ -0.47
CAPN1-215ENST00000528396 GPR68Q15743 365 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 ACSF3Q4G176 576 aaPredicted RBP12.14□□□□□ -0.47
CAPN1-215ENST00000528396 GPAT3Q53EU6 434 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 APOOLQ6UXV4 268 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 MSANTD1Q6ZTZ1 278 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 MTERF4Q7Z6M4 381 aaKnown RBP12.14□□□□□ -0.47
CAPN1-215ENST00000528396 RNF130Q86XS8 419 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 LACC1Q8IV20 430 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 CCDC71Q8IV32 467 aaPredicted RBP12.14□□□□□ -0.47
CAPN1-215ENST00000528396 MARVELD2Q8N4S9 558 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 MEIOBQ8N635 442 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 TMCO5AQ8N6Q1 288 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 OR9I1Q8NGQ6 314 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 B4GALNT2Q8NHY0 566 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 PNPT1Q8TCS8 783 aaKnown RBP12.14□□□□□ -0.47
CAPN1-215ENST00000528396 MIPOL1Q8TD10 442 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 RAB8BQ92930 207 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 VPS33AQ96AX1 596 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 RTN4RQ9BZR6 473 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 RABEP2Q9H5N1 569 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 RUBCNLQ9H714 662 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms