RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 TRAF6Q9Y4K3 522 aa9.49□□□□□ -0.89
CPSF1-203ENST00000527916 RAI1Q7Z5J4 1906 aaPredicted RBP9.48□□□□□ -0.89
CPSF1-203ENST00000527916 A0A1W2PNV4 684 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 C16orf97H3BN30 126 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 LINC01387J3KSC0 135 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 PDPK1O15530 556 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 SOX30O94993 753 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 IL33O95760 270 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 CRHP06850 196 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 LINC00032P0C843 101 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 FAM157CP0CG43 387 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 PRPS2P11908 318 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 DDX5P17844 614 aaKnown RBP9.48□□□□□ -0.89
CPSF1-203ENST00000527916 DPP4P27487 766 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 UGT2B10P36537 528 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 ASMTP46597 345 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 KCNJ5P48544 419 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 CLK3P49761 638 aaKnown RBP9.48□□□□□ -0.89
CPSF1-203ENST00000527916 LHX2P50458 406 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 NR1H2P55055 460 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 SRYQ05066 204 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 IFFO1Q0D2I5 559 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 ZNF155Q12901 538 aaPredicted RBP9.48□□□□□ -0.89
CPSF1-203ENST00000527916 GANABQ14697 944 aaKnown RBP9.48□□□□□ -0.89
CPSF1-203ENST00000527916 MLC1Q15049 377 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 CLEC12BQ2HXU8 276 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 GLYR1Q49A26 553 aaPredicted RBP9.48□□□□□ -0.89
CPSF1-203ENST00000527916 VPS26BQ4G0F5 336 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 ARL13AQ5H913 290 aaPredicted RBP9.48□□□□□ -0.89
CPSF1-203ENST00000527916 OR2A2Q6IF42 318 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 ZCCHC12Q6PEW1 402 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 LRIG3Q6UXM1 1119 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 R3HCC1LQ7Z5L2 792 aaKnown RBP9.48□□□□□ -0.89
CPSF1-203ENST00000527916 MAPK1IP1LQ8NDC0 245 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 OR6Y1Q8NGX8 325 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 TCP10LQ8TDR4 215 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 AENQ8WTP8 325 aaKnown RBP9.48□□□□□ -0.89
CPSF1-203ENST00000527916 EFHD2Q96C19 240 aaPredicted RBP9.48□□□□□ -0.89
CPSF1-203ENST00000527916 PPCDCQ96CD2 204 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 ZBED6CLQ96FA7 236 aaPredicted RBP9.48□□□□□ -0.89
CPSF1-203ENST00000527916 HS3ST6Q96QI5 342 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 REG4Q9BYZ8 158 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 FAM120CQ9NX05 1096 aaKnown RBP9.48□□□□□ -0.89
CPSF1-203ENST00000527916 ELOVL5Q9NYP7 299 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 SLC17A7Q9P2U7 560 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 PTGDR2Q9Y5Y4 395 aa9.48□□□□□ -0.89
CPSF1-203ENST00000527916 IGLV3-32A0A0A0MS00 114 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 A8MV72 311 aaPredicted RBP9.47□□□□□ -0.89
CPSF1-203ENST00000527916 TMEM114B3SHH9 223 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 B4DXG7 233 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 TNFSF13O75888 250 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 NKX2-2O95096 273 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 KCNH1O95259 989 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 CHRNGP07510 517 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 BCKDHAP12694 445 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 PEPDP12955 493 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 POU2F1P14859 743 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 ZNF708P17019 499 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 LCN1P31025 176 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 GABRA3P34903 492 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 GPC1P35052 558 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 IDUAP35475 653 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 RPL3P39023 403 aaKnown RBP9.47□□□□□ -0.89
CPSF1-203ENST00000527916 MANFP55145 182 aaKnown RBP9.47□□□□□ -0.89
CPSF1-203ENST00000527916 CLDN18P56856 261 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 B3GALT5-AS1P59052 145 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 PRR5P85299 388 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 OCRLQ01968 901 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 C17orf67Q0P5P2 114 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 CAPRIN1Q14444 709 aaKnown RBP9.47□□□□□ -0.89
CPSF1-203ENST00000527916 SH2D4BQ5SQS7 431 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 OR5M10Q6IEU7 315 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 ZNF551Q7Z340 670 aaPredicted RBP9.47□□□□□ -0.89
CPSF1-203ENST00000527916 P4HA3Q7Z4N8 544 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 MREGQ8N565 214 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 NATD1Q8N6N6 113 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 CNEP1R1Q8N9A8 125 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 CDRT4Q8N9R6 151 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 OR2M3Q8NG83 312 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 OR4K17Q8NGC6 315 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 FAM110BQ8TC76 370 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 TWIST2Q8WVJ9 160 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 IGFBPL1Q8WX77 278 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 TRMT61AQ96FX7 289 aaKnown RBP9.47□□□□□ -0.89
CPSF1-203ENST00000527916 PGM2Q96G03 612 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 ZC3HAV1LQ96H79 300 aaKnown RBP9.47□□□□□ -0.89
CPSF1-203ENST00000527916 PPP3R2Q96LZ3 170 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 TSSK3Q96PN8 268 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 G6PC3Q9BUM1 346 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 PTGES2Q9H7Z7 377 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 SH3BP4Q9P0V3 963 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 PPP4R1LQ9P1A2 415 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 CLCF1Q9UBD9 225 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 BAIAP2L1Q9UHR4 511 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 ATP6V1HQ9UI12 483 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 CDC42EP3Q9UKI2 254 aa9.47□□□□□ -0.89
CPSF1-203ENST00000527916 NUP214P35658 2090 aaPredicted RBP9.47□□□□□ -0.89
CPSF1-203ENST00000527916 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 PIP5K1BO14986 540 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms