RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 REG4Q9BYZ8 158 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 CDC42EP4Q9H3Q1 356 aaKnown RBP14.39□□□□□ -0.11
PTPRU-210ENST00000527027 HHATLQ9HCP6 504 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 MIEF1Q9NQG6 463 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 TMEM216Q9P0N5 145 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 STK38LQ9Y2H1 464 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 TIMM22Q9Y584 194 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 GXYLT2A0PJZ3 443 aa14.38□□□□□ -0.11
PTPRU-210ENST00000527027 IGKV1D-16P01601 117 aa14.38□□□□□ -0.11
PTPRU-210ENST00000527027 OPN1LWP04000 364 aa14.38□□□□□ -0.11
PTPRU-210ENST00000527027 TP53P04637 393 aaPredicted RBP14.38□□□□□ -0.11
PTPRU-210ENST00000527027 ENO1P06733 434 aaKnown RBP14.38□□□□□ -0.11
PTPRU-210ENST00000527027 TUBBP07437 444 aa14.38□□□□□ -0.11
PTPRU-210ENST00000527027 SNRPAP09012 282 aaKnown RBP14.38□□□□□ -0.11
PTPRU-210ENST00000527027 NTSP30990 170 aa14.38□□□□□ -0.11
PTPRU-210ENST00000527027 RAC1P63000 192 aa14.38□□□□□ -0.11
PTPRU-210ENST00000527027 LCP2Q13094 533 aa14.38□□□□□ -0.11
PTPRU-210ENST00000527027 GRAMD1BQ3KR37 738 aa14.38□□□□□ -0.11
PTPRU-210ENST00000527027 GTF2IRD2BQ6EKJ0 949 aa14.38□□□□□ -0.11
PTPRU-210ENST00000527027 ALKBH2Q6NS38 261 aa14.38□□□□□ -0.11
PTPRU-210ENST00000527027 HMBOX1Q6NT76 420 aa14.38□□□□□ -0.11
PTPRU-210ENST00000527027 C8orf74Q6P047 294 aa14.38□□□□□ -0.11
PTPRU-210ENST00000527027 ESPNLQ6ZVH7 1005 aa14.38□□□□□ -0.11
PTPRU-210ENST00000527027 GALNT10Q86SR1 603 aa14.38□□□□□ -0.11
PTPRU-210ENST00000527027 GTF2IRD2Q86UP8 949 aa14.38□□□□□ -0.11
PTPRU-210ENST00000527027 LILRB1Q8NHL6 650 aaPredicted RBP14.38□□□□□ -0.11
PTPRU-210ENST00000527027 RAB3IL1Q8TBN0 382 aa14.38□□□□□ -0.11
PTPRU-210ENST00000527027 TACO1Q9BSH4 297 aaKnown RBP14.38□□□□□ -0.11
PTPRU-210ENST00000527027 HDHD5Q9BXW7 423 aa14.38□□□□□ -0.11
PTPRU-210ENST00000527027 TSPYL1Q9H0U9 437 aa14.38□□□□□ -0.11
PTPRU-210ENST00000527027 WBP11Q9Y2W2 641 aaKnown RBP14.38□□□□□ -0.11
PTPRU-210ENST00000527027 PRR14LQ5THK1 2151 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 A0A0J9YW62 118 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 C7orf72A4D263 438 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 RNF212BA8MTL3 300 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 ALG1L2C9J202 215 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 NDUFB5O43674 189 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 IFI6P09912 130 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 DANCRP0C864 163 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 ATP5F1P24539 256 aaPredicted RBP14.37□□□□□ -0.11
PTPRU-210ENST00000527027 PSMA4P25789 261 aaKnown RBP14.37□□□□□ -0.11
PTPRU-210ENST00000527027 PDSS1Q5T2R2 415 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 HBMQ6B0K9 141 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 MFSD12Q6NUT3 480 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 PODNL1Q6PEZ8 512 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 EXOC3L1Q86VI1 746 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 OR4C3Q8NH37 302 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 OR2V1Q8NHB1 315 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 GPR151Q8TDV0 419 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 ACTRT2Q8TDY3 377 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 SMAP2Q8WU79 429 aaPredicted RBP14.37□□□□□ -0.11
PTPRU-210ENST00000527027 NANOS1Q8WY41 292 aaKnown RBP14.37□□□□□ -0.11
PTPRU-210ENST00000527027 PIK3R3Q92569 461 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 SLC9A6Q92581 669 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 OSTF1Q92882 214 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 ZBTB8AQ96BR9 441 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 S100PBPQ96BU1 408 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 KCNA7Q96RP8 456 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 NPAS1Q99742 590 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 C12orf49Q9H741 205 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 MYNNQ9NPC7 610 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 RNF115Q9Y4L5 304 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 ABCA1O95477 2261 aa14.37□□□□□ -0.11
PTPRU-210ENST00000527027 CHD3Q12873 2000 aaKnown RBP14.37□□□□□ -0.11
PTPRU-210ENST00000527027 A0A1W2PRB8 838 aa14.36□□□□□ -0.11
PTPRU-210ENST00000527027 TNFSF11O14788 317 aa14.36□□□□□ -0.11
PTPRU-210ENST00000527027 CLOCKO15516 846 aa14.36□□□□□ -0.11
PTPRU-210ENST00000527027 TLX2O43763 284 aaPredicted RBP14.36□□□□□ -0.11
PTPRU-210ENST00000527027 IFNA2P01563 188 aa14.36□□□□□ -0.11
PTPRU-210ENST00000527027 SOD3P08294 240 aa14.36□□□□□ -0.11
PTPRU-210ENST00000527027 PABPC4LP0CB38 370 aaKnown RBP14.36□□□□□ -0.11
PTPRU-210ENST00000527027 AGTR1P30556 359 aa14.36□□□□□ -0.11
PTPRU-210ENST00000527027 PRKAA2P54646 552 aa14.36□□□□□ -0.11
PTPRU-210ENST00000527027 ZNF844Q08AG5 666 aa14.36□□□□□ -0.11
PTPRU-210ENST00000527027 SLC29A2Q14542 456 aa14.36□□□□□ -0.11
PTPRU-210ENST00000527027 NCMAPQ5T1S8 102 aa14.36□□□□□ -0.11
PTPRU-210ENST00000527027 LCA5Q86VQ0 697 aa14.36□□□□□ -0.11
PTPRU-210ENST00000527027 HIPK1Q86Z02 1210 aa14.36□□□□□ -0.11
PTPRU-210ENST00000527027 SLC22A9Q8IVM8 553 aa14.36□□□□□ -0.11
PTPRU-210ENST00000527027 MMGT1Q8N4V1 131 aa14.36□□□□□ -0.11
PTPRU-210ENST00000527027 CEP112Q8N8E3 955 aa14.36□□□□□ -0.11
PTPRU-210ENST00000527027 FAM76AQ8TAV0 307 aa14.36□□□□□ -0.11
PTPRU-210ENST00000527027 FBXW5Q969U6 566 aa14.36□□□□□ -0.11
PTPRU-210ENST00000527027 GTPBP3Q969Y2 492 aaKnown RBP14.36□□□□□ -0.11
PTPRU-210ENST00000527027 L3HYPDHQ96EM0 354 aa14.36□□□□□ -0.11
PTPRU-210ENST00000527027 SLCO5A1Q9H2Y9 848 aa14.36□□□□□ -0.11
PTPRU-210ENST00000527027 ESRP2Q9H6T0 727 aaKnown RBP14.36□□□□□ -0.11
PTPRU-210ENST00000527027 NGBQ9NPG2 151 aa14.36□□□□□ -0.11
PTPRU-210ENST00000527027 MED17Q9NVC6 651 aa14.36□□□□□ -0.11
PTPRU-210ENST00000527027 FBXO34Q9NWN3 711 aa14.36□□□□□ -0.11
PTPRU-210ENST00000527027 SNX8Q9Y5X2 465 aa14.36□□□□□ -0.11
PTPRU-210ENST00000527027 NBEAL1Q6ZS30 2694 aa14.35□□□□□ -0.11
PTPRU-210ENST00000527027 GCM2O75603 506 aaPredicted RBP14.35□□□□□ -0.11
PTPRU-210ENST00000527027 NKX2-2O95096 273 aa14.35□□□□□ -0.11
PTPRU-210ENST00000527027 OXSR1O95747 527 aaPredicted RBP14.35□□□□□ -0.11
PTPRU-210ENST00000527027 CD3EP07766 207 aa14.35□□□□□ -0.11
PTPRU-210ENST00000527027 NGFRP08138 427 aa14.35□□□□□ -0.11
PTPRU-210ENST00000527027 PRPS2P11908 318 aa14.35□□□□□ -0.11
PTPRU-210ENST00000527027 ME2P23368 584 aa14.35□□□□□ -0.11
PTPRU-210ENST00000527027 MAP3K8P41279 467 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms