RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 OR5AK3PQ8NH89 298 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 ZFP28Q8NHY6 868 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 ZFP90Q8TF47 636 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 TSPEARQ8WU66 669 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 SLC35A4Q96G79 324 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 ART5Q96L15 291 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 BTBD9Q96Q07 612 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 RASL10BQ96S79 203 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 ZDHHC11Q9H8X9 412 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 PROK2Q9HC23 129 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 SH2D2AQ9NP31 389 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 GMEB1Q9Y692 573 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 NCKAP5O14513 1909 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 KIAA1549Q9HCM3 1950 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 GXYLT2A0PJZ3 443 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 TRIM64A6NGJ6 449 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 TUBAL3A6NHL2 446 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 TRIM64BA6NI03 449 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 NPIPA2E9PIF3 369 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 NPIPA3F8WFD2 350 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 NR5A2O00482 541 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 PEX1O43933 1283 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 WDR1O75083 606 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 BCAS2O75934 225 aaPredicted RBP9.94□□□□□ -0.82
NEDD8-204ENST00000526430 PDE9AO76083 593 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 OR6B1O95007 311 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 NKX2-2O95096 273 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 IGKV1D-16P01601 117 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 HRGP04196 525 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 ABCB1P08183 1280 aaPredicted RBP9.94□□□□□ -0.82
NEDD8-204ENST00000526430 UQCRC2P22695 453 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 SOX3P41225 446 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 TRPC1P48995 793 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 NR0B1P51843 470 aaKnown RBP9.94□□□□□ -0.82
NEDD8-204ENST00000526430 STX1BP61266 288 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 KRTAP1-1Q07627 177 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 MAPK11Q15759 364 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 DUSP5Q16690 384 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 AP1ARQ63HQ0 302 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 OR4A15Q8NGL6 344 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 FAM110BQ8TC76 370 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 MIPOL1Q8TD10 442 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 SFXN5Q8TD22 340 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 PIGTQ969N2 578 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 LCORQ96JN0 433 aaPredicted RBP9.94□□□□□ -0.82
NEDD8-204ENST00000526430 ZBTB18Q99592 522 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 YIPF4Q9BSR8 244 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 IKZF5Q9H5V7 419 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 FBXO34Q9NWN3 711 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 VAPAQ9P0L0 249 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 ARL2BPQ9Y2Y0 163 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 YARS2Q9Y2Z4 477 aaKnown RBP9.94□□□□□ -0.82
NEDD8-204ENST00000526430 PCDHB14Q9Y5E9 798 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 USF3Q68DE3 2245 aa9.94□□□□□ -0.82
NEDD8-204ENST00000526430 MEGF8Q7Z7M0 2845 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 TGP01266 2768 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 LOC100653049A0A140TA62 436 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 FXYD1O00168 92 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 CFLARO15519 480 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 TSPAN2O60636 221 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 CCDC22O60826 627 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 ERN1O75460 977 aaKnown RBP9.93□□□□□ -0.82
NEDD8-204ENST00000526430 KRT34O76011 436 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 FBXO45P0C2W1 286 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 GPC1P35052 558 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 PRKAG1P54619 331 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 CASP9P55211 416 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 RPS26P62854 115 aaKnown RBP9.93□□□□□ -0.82
NEDD8-204ENST00000526430 SORDQ00796 357 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 NNATQ16517 81 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 COX20Q5RI15 118 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 FAM91A1Q658Y4 838 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 HEPHL1Q6MZM0 1159 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 ZNF585AQ6P3V2 769 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 SLC29A4Q7RTT9 530 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 MDGA2Q7Z553 956 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 ZAR1Q86SH2 424 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 KIF18BQ86Y91 864 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 FITM2Q8N6M3 262 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 RELL2Q8NC24 303 aaPredicted RBP9.93□□□□□ -0.82
NEDD8-204ENST00000526430 OR5L2Q8NGL0 311 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 OR5M9Q8NGP3 310 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 RNF138Q8WVD3 245 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 HGDQ93099 445 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 NEURL3Q96EH8 262 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 OTUB1Q96FW1 271 aaPredicted RBP9.93□□□□□ -0.82
NEDD8-204ENST00000526430 AURKBQ96GD4 344 aaPredicted RBP9.93□□□□□ -0.82
NEDD8-204ENST00000526430 PANX1Q96RD7 426 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 RSPO3Q9BXY4 272 aaPredicted RBP9.93□□□□□ -0.82
NEDD8-204ENST00000526430 NSRP1Q9H0G5 558 aaKnown RBP9.93□□□□□ -0.82
NEDD8-204ENST00000526430 C3orf14Q9HBI5 128 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 ZCCHC3Q9NUD5 404 aaKnown RBP9.93□□□□□ -0.82
NEDD8-204ENST00000526430 DDX18Q9NVP1 670 aaKnown RBP9.93□□□□□ -0.82
NEDD8-204ENST00000526430 GIN1Q9NXP7 522 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 COPS7AQ9UBW8 275 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 PRODH2Q9UF12 536 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 NDUFAF1Q9Y375 327 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 SNX8Q9Y5X2 465 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 NPFFR2Q9Y5X5 522 aa9.93□□□□□ -0.82
NEDD8-204ENST00000526430 A0A096LPI6 279 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms