RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 KIAA0319Q5VV43 1072 aa12.96□□□□□ -0.33
LRRK1-202ENST00000525284 ENPP6Q6UWR7 440 aa12.96□□□□□ -0.33
LRRK1-202ENST00000525284 ZDHHC24Q6UX98 284 aa12.96□□□□□ -0.33
LRRK1-202ENST00000525284 DEFB132Q7Z7B7 95 aa12.96□□□□□ -0.33
LRRK1-202ENST00000525284 TMEM59Q9BXS4 323 aa12.96□□□□□ -0.33
LRRK1-202ENST00000525284 MKS1Q9NXB0 559 aa12.96□□□□□ -0.33
LRRK1-202ENST00000525284 VIRMAQ69YN4 1812 aaKnown RBP12.96□□□□□ -0.33
LRRK1-202ENST00000525284 DISP2A7MBM2 1401 aa12.96□□□□□ -0.33
LRRK1-202ENST00000525284 ANHXE9PGG2 379 aa12.96□□□□□ -0.33
LRRK1-202ENST00000525284 RDH16O75452 317 aa12.96□□□□□ -0.33
LRRK1-202ENST00000525284 ACVRL1P37023 503 aa12.96□□□□□ -0.33
LRRK1-202ENST00000525284 TMEM71Q6P5X7 295 aa12.96□□□□□ -0.33
LRRK1-202ENST00000525284 BRAT1Q6PJG6 821 aa12.96□□□□□ -0.33
LRRK1-202ENST00000525284 ACTRT3Q9BYD9 372 aa12.96□□□□□ -0.33
LRRK1-202ENST00000525284 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.96□□□□□ -0.33
LRRK1-202ENST00000525284 OR52A5Q9H2C5 316 aa12.96□□□□□ -0.33
LRRK1-202ENST00000525284 RPL11P62913 178 aaKnown RBP12.96□□□□□ -0.34
LRRK1-202ENST00000525284 NCBP2-AS2Q69YL0 99 aa12.96□□□□□ -0.34
LRRK1-202ENST00000525284 DRICH1Q6PGQ1 229 aaPredicted RBP12.96□□□□□ -0.34
LRRK1-202ENST00000525284 IL22RA1Q8N6P7 574 aa12.96□□□□□ -0.34
LRRK1-202ENST00000525284 ABHD11Q8NFV4 315 aa12.96□□□□□ -0.34
LRRK1-202ENST00000525284 SEMA6DQ8NFY4 1073 aa12.96□□□□□ -0.34
LRRK1-202ENST00000525284 CCM2LQ9NUG4 571 aaPredicted RBP12.96□□□□□ -0.34
LRRK1-202ENST00000525284 SLC39A9Q9NUM3 307 aa12.96□□□□□ -0.34
LRRK1-202ENST00000525284 MEIOCA2RUB1 952 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 KRBOX1C9JBD0 128 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 SLC7A9P82251 487 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 CNKSR3Q6P9H4 555 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 DBX2Q6ZNG2 339 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 CREB3L4Q8TEY5 395 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 CHFRQ96EP1 664 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 ZNF582Q96NG8 517 aaPredicted RBP12.95□□□□□ -0.34
LRRK1-202ENST00000525284 HAPLN3Q96S86 360 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 HSD17B14Q9BPX1 270 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 ALG8Q9BVK2 526 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 AGXT2Q9BYV1 514 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 V9GYS6 101 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 DENRO43583 198 aaKnown RBP12.95□□□□□ -0.34
LRRK1-202ENST00000525284 S100A7P31151 101 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 CNR2P34972 360 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 MMP14P50281 582 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 LILRA4P59901 499 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 TAP2Q03519 686 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 MPPED2Q15777 294 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 KIAA0895LQ68EN5 471 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 MIB2Q96AX9 1013 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 ANKRD30BLA7E2S9 258 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 HPGDSO60760 199 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 MITFO75030 526 aaPredicted RBP12.95□□□□□ -0.34
LRRK1-202ENST00000525284 SERPINA2P20848 420 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 F2RL1P55085 397 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 GSCP56915 257 aaPredicted RBP12.95□□□□□ -0.34
LRRK1-202ENST00000525284 MLF1P58340 268 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 MBTPS1Q14703 1052 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 MAMDC2Q7Z304 686 aaPredicted RBP12.95□□□□□ -0.34
LRRK1-202ENST00000525284 ACDQ96AP0 544 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 FBXL2Q9UKC9 423 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 MYO5BQ9ULV0 1848 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 DPM1O60762 260 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 INHAP05111 366 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 GALTP07902 379 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 ITGB5P18084 799 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 JAM2P57087 298 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 TLE4Q04727 773 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 SYPL2Q5VXT5 272 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 ASPGQ86U10 573 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 DIO2Q92813 273 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 CPNE4Q96A23 557 aaPredicted RBP12.95□□□□□ -0.34
LRRK1-202ENST00000525284 KIAA1191Q96A73 305 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 C20orf24Q9BUV8 137 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 MEGF11A6BM72 1044 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 ZNF44P15621 663 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 GABRA2P47869 451 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 ATP4BP51164 291 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 CLVS2Q5SYC1 327 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 CDHR3Q6ZTQ4 885 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 OR14L1PQ8NHC6 308 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 ZFAND1Q8TCF1 268 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 BPIFA2Q96DR5 249 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 ZMYND19Q96E35 227 aaPredicted RBP12.95□□□□□ -0.34
LRRK1-202ENST00000525284 CLCF1Q9UBD9 225 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 CPNE7Q9UBL6 633 aa12.95□□□□□ -0.34
LRRK1-202ENST00000525284 NXPH3O95157 252 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 PRDX3P30048 256 aaKnown RBP12.94□□□□□ -0.34
LRRK1-202ENST00000525284 PTPRCAPQ14761 206 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 MEF2DQ14814 521 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 DEFB134Q4QY38 66 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 SLC22A6Q4U2R8 563 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 NPAS4Q8IUM7 802 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 NRMQ8IXM6 262 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 DNAJC5GQ8N7S2 189 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 SAMD8Q96LT4 415 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 FEVQ99581 238 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 MINDY3Q9H8M7 445 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 EHFQ9NZC4 300 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 NFKBIEO00221 500 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 NTF3P20783 257 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 F2RP25116 425 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 PSMB10P40306 273 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 ARRB1P49407 418 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms