RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 SPRR3Q9UBC9 169 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 SAMD4AQ9UPU9 718 aaKnown RBP2.97□□□□□ -1.93
CD44-215ENST00000525241 USP16Q9Y5T5 823 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.97□□□□□ -1.93
CD44-215ENST00000525241 KRT87PA6NCN2 255 aa2.96□□□□□ -1.94
CD44-215ENST00000525241 ANKRD30BLA7E2S9 258 aa2.96□□□□□ -1.94
CD44-215ENST00000525241 CA3P07451 260 aa2.96□□□□□ -1.94
CD44-215ENST00000525241 STSP08842 583 aa2.96□□□□□ -1.94
CD44-215ENST00000525241 CYLC1P35663 651 aaPredicted RBP2.96□□□□□ -1.94
CD44-215ENST00000525241 ASMTP46597 345 aa2.96□□□□□ -1.94
CD44-215ENST00000525241 MRPS11P82912 194 aaKnown RBP2.96□□□□□ -1.94
CD44-215ENST00000525241 BCL2L1Q07817 233 aa2.96□□□□□ -1.94
CD44-215ENST00000525241 KYAT1Q16773 422 aa2.96□□□□□ -1.94
CD44-215ENST00000525241 TOR1AIP1Q5JTV8 583 aa2.96□□□□□ -1.94
CD44-215ENST00000525241 SPATA46Q5T0L3 261 aa2.96□□□□□ -1.94
CD44-215ENST00000525241 PVRIGQ6DKI7 326 aa2.96□□□□□ -1.94
CD44-215ENST00000525241 OR5M10Q6IEU7 315 aa2.96□□□□□ -1.94
CD44-215ENST00000525241 FRA10AC1Q70Z53 315 aa2.96□□□□□ -1.94
CD44-215ENST00000525241 LHFPL4Q7Z7J7 247 aa2.96□□□□□ -1.94
CD44-215ENST00000525241 TGIF2LYQ8IUE0 185 aa2.96□□□□□ -1.94
CD44-215ENST00000525241 CNNM3Q8NE01 707 aa2.96□□□□□ -1.94
CD44-215ENST00000525241 OR2L5Q8NG80 312 aa2.96□□□□□ -1.94
CD44-215ENST00000525241 GIPC3Q8TF64 312 aa2.96□□□□□ -1.94
CD44-215ENST00000525241 PINX1Q96BK5 328 aaKnown RBP2.96□□□□□ -1.94
CD44-215ENST00000525241 POLR3FQ9H1D9 316 aaPredicted RBP2.96□□□□□ -1.94
CD44-215ENST00000525241 NGBQ9NPG2 151 aa2.96□□□□□ -1.94
CD44-215ENST00000525241 ATXN10Q9UBB4 475 aa2.96□□□□□ -1.94
CD44-215ENST00000525241 ATP6V1HQ9UI12 483 aa2.96□□□□□ -1.94
CD44-215ENST00000525241 AP4B1Q9Y6B7 739 aa2.96□□□□□ -1.94
CD44-215ENST00000525241 NCAPD2Q15021 1401 aa2.95□□□□□ -1.94
CD44-215ENST00000525241 A0A0U1RQV5 110 aa2.95□□□□□ -1.94
CD44-215ENST00000525241 DHRS7CA6NNS2 312 aa2.95□□□□□ -1.94
CD44-215ENST00000525241 ANP32DO95626 131 aa2.95□□□□□ -1.94
CD44-215ENST00000525241 CHRNA1P02708 482 aa2.95□□□□□ -1.94
CD44-215ENST00000525241 SEMG1P04279 462 aa2.95□□□□□ -1.94
CD44-215ENST00000525241 ANXA3P12429 323 aa2.95□□□□□ -1.94
CD44-215ENST00000525241 ADORA2BP29275 332 aa2.95□□□□□ -1.94
CD44-215ENST00000525241 SLC26A2P50443 739 aa2.95□□□□□ -1.94
CD44-215ENST00000525241 GNB2P62879 340 aa2.95□□□□□ -1.94
CD44-215ENST00000525241 OTUD4Q01804 1114 aaKnown RBP2.95□□□□□ -1.94
CD44-215ENST00000525241 OC90Q02509 493 aaPredicted RBP2.95□□□□□ -1.94
CD44-215ENST00000525241 LANCL3Q6ZV70 420 aa2.95□□□□□ -1.94
CD44-215ENST00000525241 SYVN1Q86TM6 617 aa2.95□□□□□ -1.94
CD44-215ENST00000525241 CBWD2Q8IUF1 395 aa2.95□□□□□ -1.94
CD44-215ENST00000525241 ZSCAN4Q8NAM6 433 aaPredicted RBP2.95□□□□□ -1.94
CD44-215ENST00000525241 OR2T33Q8NG76 320 aa2.95□□□□□ -1.94
CD44-215ENST00000525241 OR10H4Q8NGA5 316 aa2.95□□□□□ -1.94
CD44-215ENST00000525241 IL4I1Q96RQ9 567 aa2.95□□□□□ -1.94
CD44-215ENST00000525241 PLEKHF1Q96S99 279 aa2.95□□□□□ -1.94
CD44-215ENST00000525241 KCNK16Q96T55 309 aa2.95□□□□□ -1.94
CD44-215ENST00000525241 ZNF184Q99676 751 aaPredicted RBP2.95□□□□□ -1.94
CD44-215ENST00000525241 TBCDQ9BTW9 1192 aa2.95□□□□□ -1.94
CD44-215ENST00000525241 ASB8Q9H765 288 aa2.95□□□□□ -1.94
CD44-215ENST00000525241 CAB39LQ9H9S4 337 aa2.95□□□□□ -1.94
CD44-215ENST00000525241 ONECUT1Q9UBC0 465 aa2.95□□□□□ -1.94
CD44-215ENST00000525241 RNF6Q9Y252 685 aa2.95□□□□□ -1.94
CD44-215ENST00000525241 PPIAL4AQ9Y536 164 aa2.95□□□□□ -1.94
CD44-215ENST00000525241 CLCA3PQ9Y6N3 262 aa2.95□□□□□ -1.94
CD44-215ENST00000525241 C19orf81C9J6K1 198 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 PRPSAP2O60256 369 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 STX11O75558 287 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 LYPLA1O75608 230 aaPredicted RBP2.94□□□□□ -1.94
CD44-215ENST00000525241 GPX5O75715 221 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 STAM2O75886 525 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 ACTL6AO96019 429 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 DPP4P27487 766 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 AXLP30530 894 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 PTGFRP43088 359 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 GNPDA1P46926 289 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 RPL29P47914 159 aaKnown RBP2.94□□□□□ -1.94
CD44-215ENST00000525241 CAMLGP49069 296 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 DHPSP49366 369 aaPredicted RBP2.94□□□□□ -1.94
CD44-215ENST00000525241 IL1RL1Q01638 556 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 PARP10Q53GL7 1025 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 OTPQ5XKR4 325 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 CNSTQ6PJW8 725 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 ISLR2Q6UXK2 745 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 LRRC70Q7Z2Q7 622 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 C17orf82Q86X59 251 aaPredicted RBP2.94□□□□□ -1.94
CD44-215ENST00000525241 OR2A12Q8NGT7 310 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 TRUB1Q8WWH5 349 aaKnown RBP2.94□□□□□ -1.94
CD44-215ENST00000525241 IMMP1LQ96LU5 166 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 C1orf21Q9H246 121 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 ECT2Q9H8V3 914 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 VAT1LQ9HCJ6 419 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 POLD4Q9HCU8 107 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 AGPAT5Q9NUQ2 364 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 OR1A1Q9P1Q5 309 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 CYTH4Q9UIA0 394 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 CRLS1Q9UJA2 301 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 ZNF221Q9UK13 617 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 MGAT4BQ9UQ53 548 aa2.94□□□□□ -1.94
CD44-215ENST00000525241 ARHGAP23Q9P227 1491 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 WI2-2373I1.2A0A1W2PRP0 233 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 FAM74A7A6NL05 159 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 PANO1I0J062 215 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 DUX1O43812 170 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 EFNA2O43921 213 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 VPS26AO75436 327 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 IGLV1-47P01700 117 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms