RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 HES3Q5TGS1 186 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 FRMPD2BQ6IN97 320 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 AGTRAPQ6RW13 159 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 SPESP1Q6UW49 350 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 ZCCHC23Q6ZST2 131 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 FAM92BQ6ZTR7 304 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 GOLGA7Q7Z5G4 137 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 ARHGAP22Q7Z5H3 698 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 TBC1D1Q86TI0 1168 aaPredicted RBP2.74□□□□□ -1.97
CSDE1-208ENST00000524652 AMIGO1Q86WK6 493 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 PLD3Q8IV08 490 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 C10orf107Q8IVU9 208 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 KLHDC8AQ8IYD2 350 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 LSMEM2Q8N112 164 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 RIBC1Q8N443 379 aaPredicted RBP2.74□□□□□ -1.97
CSDE1-208ENST00000524652 RNF175Q8N4F7 328 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 CHCHD4Q8N4Q1 142 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 BMPERQ8N8U9 685 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 AVL9Q8NBF6 648 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 ZNF740Q8NDX6 193 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 OR2L8Q8NGY9 312 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 OR10G6Q8NH81 332 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 RHEBL1Q8TAI7 183 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 ACMSDQ8TDX5 336 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 SNAPC3Q92966 411 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 RAD51AP1Q96B01 352 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 FBXL8Q96CD0 374 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 PGM2Q96G03 612 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 TMEM19Q96HH6 336 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 APOPT1Q96IL0 206 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 PKNOX2Q96KN3 472 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 TSNARE1Q96NA8 513 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 TGM7Q96PF1 710 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 FAM111AQ96PZ2 611 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 TMEM237Q96Q45 408 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 CSF3RQ99062 836 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 CCDC77Q9BR77 488 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 ACAT2Q9BWD1 397 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 TSSK1BQ9BXA7 367 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 C20orf27Q9GZN8 174 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 RAB33BQ9H082 229 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 VIPAS39Q9H9C1 493 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 CHODLQ9H9P2 273 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 UCK1Q9HA47 277 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 PARVBQ9HBI1 364 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 NMRAL1Q9HBL8 299 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 APMAPQ9HDC9 416 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 NOX4Q9NPH5 578 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 RASSF1Q9NS23 344 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 ABCF3Q9NUQ8 709 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 HRASLS2Q9NWW9 162 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 C1RLQ9NZP8 487 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 SPATA7Q9P0W8 599 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 PDP2Q9P2J9 529 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 GRHPRQ9UBQ7 328 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 TAC3Q9UHF0 121 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 PTBP2Q9UKA9 531 aaKnown RBP2.74□□□□□ -1.97
CSDE1-208ENST00000524652 PCTPQ9UKL6 214 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 KLK13Q9UKR3 277 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 POMT2Q9UKY4 750 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 CDC14AQ9UNH5 594 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 SLC22A14Q9Y267 594 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 ACOT9Q9Y305 439 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 PLLPQ9Y342 182 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 IKBKGQ9Y6K9 419 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 NBEAL2Q6ZNJ1 2754 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 APC2O95996 2303 aa2.74□□□□□ -1.97
CSDE1-208ENST00000524652 ACACAQ13085 2346 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 KCNE1BA0A087WTH5 132 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 A0A0J9YY10 115 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 FEZF1A0PJY2 475 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 TMEM120BA0PK00 339 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 GSAPA4D1B5 854 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 OR2A25A4D2G3 310 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 TLCD2A6NGC4 264 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 SLC9B1P1A6NJY1 282 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 SUPT3HB4E1H0 165 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 C16orf97H3BN30 126 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 STX16-NPEPL1H3BU86 382 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 TAF4O00268 1085 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 UBFD1O14562 309 aaKnown RBP2.73□□□□□ -1.97
CSDE1-208ENST00000524652 STX16O14662 325 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 RGS16O15492 202 aaPredicted RBP2.73□□□□□ -1.97
CSDE1-208ENST00000524652 DUX1O43812 170 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 DNAJB6O75190 326 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 NDUFS7O75251 213 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 CSO75390 466 aaKnown RBP2.73□□□□□ -1.97
CSDE1-208ENST00000524652 SUPT3HO75486 399 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 LYPLA1O75608 230 aaPredicted RBP2.73□□□□□ -1.97
CSDE1-208ENST00000524652 RGS11O94810 467 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 ETHE1O95571 254 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 CPNE6O95741 557 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 APOHP02749 345 aaPredicted RBP2.73□□□□□ -1.97
CSDE1-208ENST00000524652 STATHP02808 62 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 MT-ND3P03897 115 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 CATP04040 527 aaKnown RBP2.73□□□□□ -1.97
CSDE1-208ENST00000524652 GSTA1P08263 222 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 RPS17P08708 135 aaKnown RBP2.73□□□□□ -1.97
CSDE1-208ENST00000524652 ANXA5P08758 320 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 FREM3P0C091 2139 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms