RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 ZFP90Q8TF47 636 aa11.39□□□□□ -0.59
CCNC-216ENST00000523961 PHF10Q8WUB8 498 aaKnown RBP11.39□□□□□ -0.59
CCNC-216ENST00000523961 GTF2H4Q92759 462 aa11.39□□□□□ -0.59
CCNC-216ENST00000523961 RAB8BQ92930 207 aa11.39□□□□□ -0.59
CCNC-216ENST00000523961 NMUR2Q9GZQ4 415 aa11.39□□□□□ -0.59
CCNC-216ENST00000523961 ZNF385DQ9H6B1 395 aa11.39□□□□□ -0.59
CCNC-216ENST00000523961 POLE3Q9NRF9 147 aa11.39□□□□□ -0.59
CCNC-216ENST00000523961 PNPLA3Q9NST1 481 aa11.39□□□□□ -0.59
CCNC-216ENST00000523961 TAS2R10Q9NYW0 307 aa11.39□□□□□ -0.59
CCNC-216ENST00000523961 MED11Q9P086 117 aa11.39□□□□□ -0.59
CCNC-216ENST00000523961 TNFRSF10DQ9UBN6 386 aa11.39□□□□□ -0.59
CCNC-216ENST00000523961 SLC6A5Q9Y345 797 aa11.39□□□□□ -0.59
CCNC-216ENST00000523961 USP9XQ93008 2570 aaPredicted RBP11.39□□□□□ -0.59
CCNC-216ENST00000523961 NCKAP5O14513 1909 aa11.39□□□□□ -0.59
CCNC-216ENST00000523961 NPIPA5A0A0B4J1W7 369 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 C17orf51A8MQB3 221 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 NPIPA7E9PJI5 369 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 NPIPB9F8W1W9 429 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 H3BNH8 94 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 HMGN4O00479 90 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 ZG16O60844 167 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 WDR1O75083 606 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 ACTL6AO96019 429 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 HOXD4P09016 255 aaPredicted RBP11.38□□□□□ -0.59
CCNC-216ENST00000523961 NPIPA8P0DM63 369 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 GABRA1P14867 456 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 CAPN3P20807 821 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 CRYZQ08257 329 aaKnown RBP11.38□□□□□ -0.59
CCNC-216ENST00000523961 KLHL26Q53HC5 615 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 EMC4Q5J8M3 183 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 VASNQ6EMK4 673 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 TMEM211Q6ICI0 200 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 CGB2Q6NT52 195 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 ZNF585AQ6P3V2 769 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 SLC2A7Q6PXP3 512 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 RPTNQ6XPR3 784 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 C3P1Q6ZMU1 363 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 MTERF4Q7Z6M4 381 aaKnown RBP11.38□□□□□ -0.59
CCNC-216ENST00000523961 IFNEQ86WN2 208 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 PM20D2Q8IYS1 436 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 GATSQ8NAP1 163 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 OR5M9Q8NGP3 310 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 PNPT1Q8TCS8 783 aaKnown RBP11.38□□□□□ -0.59
CCNC-216ENST00000523961 ABTB1Q969K4 478 aaPredicted RBP11.38□□□□□ -0.59
CCNC-216ENST00000523961 ROPN1LQ96C74 230 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 CCDC120Q96HB5 630 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 ZNF317Q96PQ6 595 aaPredicted RBP11.38□□□□□ -0.59
CCNC-216ENST00000523961 DMRTA2Q96SC8 542 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 TIMP4Q99727 224 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 ZNF350Q9GZX5 532 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 PAIP1Q9H074 479 aaKnown RBP11.38□□□□□ -0.59
CCNC-216ENST00000523961 TPT1P8Q9HAU6 139 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 SLC52A3Q9NQ40 469 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 SLC6A13Q9NSD5 602 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 KLHL14Q9P2G3 628 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 LIPT1Q9Y234 373 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 WDR45Q9Y484 360 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 RELNP78509 3460 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 FREM3P0C091 2139 aa11.38□□□□□ -0.59
CCNC-216ENST00000523961 DOPEY2Q9Y3R5 2298 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 A0A096LPI6 279 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 A0A1W2PP18 115 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 B4DXG7 233 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 ZIC3O60481 467 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 C1QCP02747 245 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 RNF224P0DH78 156 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 BMP7P18075 431 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 HK1P19367 917 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 ACVR2AP27037 513 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 PTGER4P35408 488 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 SMSP52788 366 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 HPCAP84074 193 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 SF3B4Q15427 424 aaKnown RBP eCLIP11.37□□□□□ -0.591e-7■■■■■ 35
CCNC-216ENST00000523961 GPR68Q15743 365 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 ZNF141Q15928 474 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 ZNF630Q2M218 657 aaPredicted RBP11.37□□□□□ -0.59
CCNC-216ENST00000523961 GLYR1Q49A26 553 aaPredicted RBP11.37□□□□□ -0.59
CCNC-216ENST00000523961 GTDC1Q4AE62 458 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 GPAT3Q53EU6 434 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 COX20Q5RI15 118 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 LRIF1Q5T3J3 769 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 AP1ARQ63HQ0 302 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 AAGABQ6PD74 315 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 ENPP6Q6UWR7 440 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 ZNF614Q8N883 585 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 PHOSPHO1Q8TCT1 267 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 TSPEARQ8WU66 669 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 OIT3Q8WWZ8 545 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 C1GALT1C1Q96EU7 318 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 SFXN2Q96NB2 322 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 TRNT1Q96Q11 434 aaKnown RBP11.37□□□□□ -0.59
CCNC-216ENST00000523961 UGT2B28Q9BY64 529 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 RAD21L1Q9H4I0 556 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 THUMPD1Q9NXG2 353 aaKnown RBP11.37□□□□□ -0.59
CCNC-216ENST00000523961 ALKBH4Q9NXW9 302 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 MKLN1Q9UL63 735 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 DTNAQ9Y4J8 743 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 PCDHB14Q9Y5E9 798 aa11.37□□□□□ -0.59
CCNC-216ENST00000523961 A0A087WZY1 265 aa11.36□□□□□ -0.59
CCNC-216ENST00000523961 AHRRA9YTQ3 701 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms