RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 ERVK-19Q9WJR5 959 aa23.96■■□□□ 1.43
COL13A1-214ENST00000522165 LAMA1P25391 3075 aa23.96■■□□□ 1.43
COL13A1-214ENST00000522165 MN1Q10571 1320 aaPredicted RBP23.96■■□□□ 1.43
COL13A1-214ENST00000522165 LYPD3O95274 346 aa23.96■■□□□ 1.43
COL13A1-214ENST00000522165 DBTP11182 482 aaKnown RBP23.96■■□□□ 1.43
COL13A1-214ENST00000522165 DRD5P21918 477 aa23.96■■□□□ 1.43
COL13A1-214ENST00000522165 GALNSP34059 522 aa23.96■■□□□ 1.43
COL13A1-214ENST00000522165 GPR4P46093 362 aa23.96■■□□□ 1.43
COL13A1-214ENST00000522165 ENTPD1P49961 510 aa23.96■■□□□ 1.43
COL13A1-214ENST00000522165 PGDP52209 483 aa23.96■■□□□ 1.43
COL13A1-214ENST00000522165 VBP1P61758 197 aa23.96■■□□□ 1.43
COL13A1-214ENST00000522165 GPLD1P80108 840 aa23.96■■□□□ 1.43
COL13A1-214ENST00000522165 SERTAD2Q14140 314 aa23.96■■□□□ 1.43
COL13A1-214ENST00000522165 SNAPC1Q16533 368 aa23.96■■□□□ 1.43
COL13A1-214ENST00000522165 SYT14P1Q58G82 188 aa23.96■■□□□ 1.43
COL13A1-214ENST00000522165 PDZK1Q5T2W1 519 aa23.96■■□□□ 1.43
COL13A1-214ENST00000522165 MAMSTRQ6ZN01 415 aa23.96■■□□□ 1.43
COL13A1-214ENST00000522165 ZNF367Q7RTV3 350 aa23.96■■□□□ 1.43
COL13A1-214ENST00000522165 NDNFQ8TB73 568 aa23.96■■□□□ 1.43
COL13A1-214ENST00000522165 ELF4Q99607 663 aaPredicted RBP23.96■■□□□ 1.43
COL13A1-214ENST00000522165 EVA1AQ9H8M9 152 aa23.96■■□□□ 1.43
COL13A1-214ENST00000522165 LANCL2Q9NS86 450 aa23.96■■□□□ 1.43
COL13A1-214ENST00000522165 SEMA5BQ9P283 1151 aa23.96■■□□□ 1.43
COL13A1-214ENST00000522165 CLPXO76031 633 aa23.95■■□□□ 1.42
COL13A1-214ENST00000522165 IFNA16P05015 189 aa23.95■■□□□ 1.42
COL13A1-214ENST00000522165 SNAP47Q5SQN1 464 aa23.95■■□□□ 1.42
COL13A1-214ENST00000522165 D2HGDHQ8N465 521 aa23.95■■□□□ 1.42
COL13A1-214ENST00000522165 RCBTB1Q8NDN9 531 aa23.95■■□□□ 1.42
COL13A1-214ENST00000522165 RPL3LQ92901 407 aaKnown RBP23.95■■□□□ 1.42
COL13A1-214ENST00000522165 SH3GL3Q99963 347 aa23.95■■□□□ 1.42
COL13A1-214ENST00000522165 PELOQ9BRX2 385 aaKnown RBP23.95■■□□□ 1.42
COL13A1-214ENST00000522165 OR10A5Q9H207 317 aa23.95■■□□□ 1.42
COL13A1-214ENST00000522165 NCF4Q15080 339 aa23.95■■□□□ 1.42
COL13A1-214ENST00000522165 WDR88Q6ZMY6 472 aa23.95■■□□□ 1.42
COL13A1-214ENST00000522165 SLC46A3Q7Z3Q1 461 aa23.95■■□□□ 1.42
COL13A1-214ENST00000522165 DEFB123Q8N688 67 aa23.95■■□□□ 1.42
COL13A1-214ENST00000522165 C16orf52Q8NHV5 167 aa23.95■■□□□ 1.42
COL13A1-214ENST00000522165 CNOT9Q92600 299 aaKnown RBP23.95■■□□□ 1.42
COL13A1-214ENST00000522165 LRR1Q96L50 414 aa23.95■■□□□ 1.42
COL13A1-214ENST00000522165 Q9N2J8 555 aa23.95■■□□□ 1.42
COL13A1-214ENST00000522165 KRCC1Q9NPI7 259 aaPredicted RBP23.95■■□□□ 1.42
COL13A1-214ENST00000522165 IL20Q9NYY1 176 aa23.95■■□□□ 1.42
COL13A1-214ENST00000522165 CT45A8P0DMV1 189 aa23.94■■□□□ 1.42
COL13A1-214ENST00000522165 CT45A9P0DMV2 189 aa23.94■■□□□ 1.42
COL13A1-214ENST00000522165 GNSP15586 552 aa23.94■■□□□ 1.42
COL13A1-214ENST00000522165 ARRB1P49407 418 aaPredicted RBP23.94■■□□□ 1.42
COL13A1-214ENST00000522165 MLLT10P55197 1068 aa23.94■■□□□ 1.42
COL13A1-214ENST00000522165 NCS1P62166 190 aa23.94■■□□□ 1.42
COL13A1-214ENST00000522165 BIKQ13323 160 aa23.94■■□□□ 1.42
COL13A1-214ENST00000522165 CT45A2Q5DJT8 189 aa23.94■■□□□ 1.42
COL13A1-214ENST00000522165 LYSMD4Q5XG99 296 aa23.94■■□□□ 1.42
COL13A1-214ENST00000522165 ZNF615Q8N8J6 731 aa23.94■■□□□ 1.42
COL13A1-214ENST00000522165 OR1L3Q8NH93 324 aa23.94■■□□□ 1.42
COL13A1-214ENST00000522165 WDR36Q8NI36 951 aaKnown RBP23.94■■□□□ 1.42
COL13A1-214ENST00000522165 TMEM163Q8TC26 289 aa23.94■■□□□ 1.42
COL13A1-214ENST00000522165 OSTF1Q92882 214 aa23.94■■□□□ 1.42
COL13A1-214ENST00000522165 LGALS12Q96DT0 336 aa23.94■■□□□ 1.42
COL13A1-214ENST00000522165 MVB12AQ96EY5 273 aa23.94■■□□□ 1.42
COL13A1-214ENST00000522165 TMEM80Q96HE8 168 aa23.94■■□□□ 1.42
COL13A1-214ENST00000522165 ZNF582Q96NG8 517 aaPredicted RBP23.94■■□□□ 1.42
COL13A1-214ENST00000522165 ASXL3Q9C0F0 2248 aa23.94■■□□□ 1.42
COL13A1-214ENST00000522165 INHBBP09529 407 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 ALAS2P22557 587 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 HOXA6P31267 233 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 OR1D4P47884 311 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 ARMCX4Q5H9R4 360 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 GRAMD2AQ8IUY3 354 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 SLC41A2Q96JW4 573 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 OR5M11Q96RB7 305 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 ZNF559Q9BR84 538 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 C14orf105Q9NVL8 296 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 ZNF223Q9UK11 482 aaPredicted RBP23.93■■□□□ 1.42
COL13A1-214ENST00000522165 GMEB2Q9UKD1 530 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 CCDC163A0A0D9SF12 145 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 M0R3G1 203 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 CLPSP04118 112 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 ATXN8OSP0DMR3 200 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 GCGRP47871 477 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 DHPSP49366 369 aaPredicted RBP23.93■■□□□ 1.42
COL13A1-214ENST00000522165 MOGQ16653 247 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 CLEC12AQ5QGZ9 265 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 ZNF620Q6ZNG0 422 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 MED25Q71SY5 747 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 PRSS42Q7Z5A4 293 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 ZBTB46Q86UZ6 589 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 RNF113BQ8IZP6 322 aaKnown RBP23.93■■□□□ 1.42
COL13A1-214ENST00000522165 ZNF614Q8N883 585 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 PTCHD1Q96NR3 888 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 SLC38A2Q96QD8 506 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 PLGRKTQ9HBL7 147 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 TBC1D23Q9NUY8 699 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 MUTYHQ9UIF7 546 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 MMACHCQ9Y4U1 282 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 CABIN1Q9Y6J0 2220 aa23.93■■□□□ 1.42
COL13A1-214ENST00000522165 CDC42EP2O14613 210 aa23.92■■□□□ 1.42
COL13A1-214ENST00000522165 FOLR1P15328 257 aa23.92■■□□□ 1.42
COL13A1-214ENST00000522165 PTNP21246 168 aa23.92■■□□□ 1.42
COL13A1-214ENST00000522165 CSTF2P33240 577 aaKnown RBP eCLIP23.92■■□□□ 1.42
COL13A1-214ENST00000522165 ZNF141Q15928 474 aa23.92■■□□□ 1.42
COL13A1-214ENST00000522165 C11orf74Q86VG3 221 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms