RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 SMPD2O60906 423 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 OXSR1O95747 527 aaPredicted RBP13.62□□□□□ -0.23
CSMD1-207ENST00000520451 PLGP00747 810 aaPredicted RBP13.62□□□□□ -0.23
CSMD1-207ENST00000520451 INHBBP09529 407 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 ACP2P11117 423 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 ZNF17P17021 662 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 KRT4P19013 534 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 MAP3K8P41279 467 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 SLC6A8P48029 635 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 Q5PR19 223 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 ANKRD34AQ69YU3 496 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 FIGNL1Q6PIW4 674 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 Q6ZSR9 355 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 FAM214BQ7L5A3 538 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 TDRPQ86YL5 185 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 C10orf107Q8IVU9 208 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 C4orf33Q8N1A6 199 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 OR4C3Q8NH37 302 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 EPS8L3Q8TE67 593 aaKnown RBP13.62□□□□□ -0.23
CSMD1-207ENST00000520451 PIGTQ969N2 578 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 GIMAP5Q96F15 307 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 FCRL1Q96LA6 429 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 CCL19Q99731 98 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 ZNF395Q9H8N7 513 aaPredicted RBP13.62□□□□□ -0.23
CSMD1-207ENST00000520451 PPCSQ9HAB8 311 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 HHATLQ9HCP6 504 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 NTMQ9P121 344 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 BAIAP2L1Q9UHR4 511 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 MID2Q9UJV3 735 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 CLEC4AQ9UMR7 237 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 EMC9Q9Y3B6 208 aa13.62□□□□□ -0.23
CSMD1-207ENST00000520451 PCNX3Q9H6A9 2034 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 TBX19O60806 448 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 KCNK2O95069 426 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 CHEK2O96017 543 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 NGFRP08138 427 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 LINC00032P0C843 101 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 EFNA1P20827 205 aaPredicted RBP13.61□□□□□ -0.23
CSMD1-207ENST00000520451 FPR1P21462 350 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 TBXA2RP21731 343 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 FRKP42685 505 aaPredicted RBP13.61□□□□□ -0.23
CSMD1-207ENST00000520451 ZNF41P51814 821 aaPredicted RBP13.61□□□□□ -0.23
CSMD1-207ENST00000520451 SLC18A2Q05940 514 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 LTBQ06643 244 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 PDE7AQ13946 482 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 PCLAFQ15004 111 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 ACKR1Q16570 336 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 DUSP5Q16690 384 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.61□□□□□ -0.23
CSMD1-207ENST00000520451 GALNTL6Q49A17 601 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 RFTN2Q52LD8 501 aaPredicted RBP13.61□□□□□ -0.23
CSMD1-207ENST00000520451 MFSD12Q6NUT3 480 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 ZAR1Q86SH2 424 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 WDR75Q8IWA0 830 aaKnown RBP13.61□□□□□ -0.23
CSMD1-207ENST00000520451 GTPBP8Q8N3Z3 284 aaPredicted RBP13.61□□□□□ -0.23
CSMD1-207ENST00000520451 COX18Q8N8Q8 333 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 SLC16A11Q8NCK7 471 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 LRRN4CLQ8ND94 238 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 OR6Y1Q8NGX8 325 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 OR10D3Q8NH80 312 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 OTUB1Q96FW1 271 aaPredicted RBP13.61□□□□□ -0.23
CSMD1-207ENST00000520451 SH3YL1Q96HL8 342 aaPredicted RBP13.61□□□□□ -0.23
CSMD1-207ENST00000520451 HS3ST6Q96QI5 342 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 PIP5K1AQ99755 562 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 TRMOQ9BU70 441 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 GATA5Q9BWX5 397 aaPredicted RBP13.61□□□□□ -0.23
CSMD1-207ENST00000520451 TUBB1Q9H4B7 451 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 ACSS1Q9NUB1 689 aaPredicted RBP13.61□□□□□ -0.23
CSMD1-207ENST00000520451 MCTS1Q9ULC4 181 aaKnown RBP13.61□□□□□ -0.23
CSMD1-207ENST00000520451 TMED5Q9Y3A6 229 aa13.61□□□□□ -0.23
CSMD1-207ENST00000520451 A0A1W2PRB8 838 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 LSM1O15116 133 aaKnown RBP13.6□□□□□ -0.23
CSMD1-207ENST00000520451 SYNGR4O95473 234 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 OPN1LWP04000 364 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 ALOX5P09917 674 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 HPGDP15428 266 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 ASMTP46597 345 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 CTBP2P56545 445 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 PLPPR5Q32ZL2 321 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 KANK2Q63ZY3 851 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 CLEC9AQ6UXN8 241 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 RNF165Q6ZSG1 346 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 C22orf34Q6ZV56 151 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 DDIASQ8IXT1 998 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 LRRC75A-AS1Q8N1F1 130 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 OR6K3Q8NGY3 331 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 FAM110BQ8TC76 370 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 JADE3Q92613 823 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 CAVIN3Q969G5 261 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 ZBTB8AQ96BR9 441 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 C16orf58Q96GQ5 468 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 GMPPAQ96IJ6 420 aaPredicted RBP13.6□□□□□ -0.23
CSMD1-207ENST00000520451 MARK4Q96L34 752 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 RNF145Q96MT1 663 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 NPAS1Q99742 590 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 TMEM185BQ9H7F4 350 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 MED17Q9NVC6 651 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 FBXO34Q9NWN3 711 aa13.6□□□□□ -0.23
CSMD1-207ENST00000520451 PAQR5Q9NXK6 330 aaPredicted RBP13.6□□□□□ -0.23
CSMD1-207ENST00000520451 DNAJC15Q9Y5T4 150 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms