RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-222	ENST00000520400	ERC1	Q8IUD2	1116 aa		3.42	□□□□□ -1.86
CTNNA1-222	ENST00000520400	CENPS	Q8N2Z9	138 aa		3.42	□□□□□ -1.86
CTNNA1-222	ENST00000520400	LINC00612	Q8N6U2	182 aa		3.42	□□□□□ -1.86
CTNNA1-222	ENST00000520400	KLHL30-AS1	Q8NEE0	82 aa		3.42	□□□□□ -1.86
CTNNA1-222	ENST00000520400	RFESD	Q8TAC1	157 aa		3.42	□□□□□ -1.86
CTNNA1-222	ENST00000520400	AGAP11	Q8TF27	550 aa		3.42	□□□□□ -1.86
CTNNA1-222	ENST00000520400	SELENOM	Q8WWX9	145 aa		3.42	□□□□□ -1.86
CTNNA1-222	ENST00000520400	ART4	Q93070	314 aa		3.42	□□□□□ -1.86
CTNNA1-222	ENST00000520400	CCT8L2	Q96SF2	557 aa		3.42	□□□□□ -1.86
CTNNA1-222	ENST00000520400	APOL2	Q9BQE5	337 aa		3.42	□□□□□ -1.86
CTNNA1-222	ENST00000520400	TM2D1	Q9BX74	207 aa		3.42	□□□□□ -1.86
CTNNA1-222	ENST00000520400	TRIM9	Q9C026	710 aa		3.42	□□□□□ -1.86
CTNNA1-222	ENST00000520400	NACA2	Q9H009	215 aa		3.42	□□□□□ -1.86
CTNNA1-222	ENST00000520400	KAT8	Q9H7Z6	458 aa	Known RBP	3.42	□□□□□ -1.86
CTNNA1-222	ENST00000520400	SLC7A10	Q9NS82	523 aa		3.42	□□□□□ -1.86
CTNNA1-222	ENST00000520400	BCAP29	Q9UHQ4	241 aa		3.42	□□□□□ -1.86
CTNNA1-222	ENST00000520400	ZNF490	Q9ULM2	529 aa	Predicted RBP	3.42	□□□□□ -1.86
CTNNA1-222	ENST00000520400	DUSP12	Q9UNI6	340 aa		3.42	□□□□□ -1.86
CTNNA1-222	ENST00000520400	CHD8	Q9HCK8	2581 aa		3.42	□□□□□ -1.86
CTNNA1-222	ENST00000520400	TDRD6	O60522	2096 aa	Known RBP	3.42	□□□□□ -1.86
CTNNA1-222	ENST00000520400	CDC42BPG	Q6DT37	1551 aa		3.42	□□□□□ -1.86
CTNNA1-222	ENST00000520400	ABCA3	Q99758	1704 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	TRPM3	Q9HCF6	1732 aa	Predicted RBP	3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	EIF3A	Q14152	1382 aa	Known RBP	3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	TTC26	A0AVF1	554 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400		F8WDY8	70 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	LGALS8	O00214	317 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	SDHD	O14521	159 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	PHOX2A	O14813	284 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	EFNA2	O43921	213 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	SSX5	O60225	188 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	HSPA5	P11021	654 aa	Known RBP	3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	XRCC1	P18887	633 aa	Predicted RBP	3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	GMFB	P60983	142 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	CXCL6	P80162	114 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	EXOSC2	Q13868	293 aa	Known RBP	3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	SLC10A1	Q14973	349 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	SLC1A5	Q15758	541 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400		Q1RN00	199 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	TIMM50	Q3ZCQ8	353 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	HIGD2B	Q4VC39	106 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	LCE1E	Q5T753	118 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	GCNT7	Q6ZNI0	430 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400		Q7L0L9	218 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	NET1	Q7Z628	596 aa	Predicted RBP	3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	TSEN54	Q7Z6J9	526 aa	Known RBP	3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	LHFPL4	Q7Z7J7	247 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	HSCB	Q8IWL3	235 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	CERS5	Q8N5B7	392 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	TMEM121	Q9BTD3	319 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	IKZF5	Q9H5V7	419 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	ECT2	Q9H8V3	914 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	LIN28A	Q9H9Z2	209 aa	Known RBP	3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	UTP6	Q9NYH9	597 aa	Known RBP	3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	TAS2R3	Q9NYW6	316 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	RAI14	Q9P0K7	980 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	CIDEB	Q9UHD4	219 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	VIRMA	Q69YN4	1812 aa	Known RBP	3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	TECPR2	O15040	1411 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	DCC	P43146	1447 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	NCAPD2	Q15021	1401 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	PIEZO1	Q92508	2521 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	ATP8B3	O60423	1300 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	C1orf167	Q5SNV9	1468 aa		3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	COL22A1	Q8NFW1	1626 aa	Predicted RBP	3.41	□□□□□ -1.86
CTNNA1-222	ENST00000520400	BAHCC1	Q9P281	2608 aa		3.4	□□□□□ -1.86
CTNNA1-222	ENST00000520400	CDX4	O14627	284 aa	Predicted RBP	3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	TM9SF1	O15321	606 aa		3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	RHBDL1	O75783	438 aa		3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	TRIM16	O95361	564 aa		3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	NUDT14	O95848	222 aa		3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	JCHAIN	P01591	159 aa		3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	THY1	P04216	161 aa		3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	SLC35E2	P0CK97	266 aa		3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	PAICS	P22234	425 aa	Known RBP	3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	ADRA1A	P35348	466 aa		3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	CYLC1	P35663	651 aa	Predicted RBP	3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	ALDH3B2	P48448	385 aa		3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	NUMB	P49757	651 aa		3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	ARHGDIB	P52566	201 aa		3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	LIM2	P55344	173 aa		3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	PPIA	P62937	165 aa	Known RBP	3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	TRA2B	P62995	288 aa	Known RBP	3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	NOP14	P78316	857 aa	Known RBP	3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	BEND6	Q5SZJ8	279 aa	Predicted RBP	3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	FAM120AOS	Q5T036	256 aa		3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	ZNF57	Q68EA5	555 aa	Predicted RBP	3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	PPIP5K1	Q6PFW1	1433 aa		3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	BTNL3	Q6UXE8	466 aa		3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	C10orf71	Q711Q0	1435 aa		3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	CYS1	Q717R9	158 aa		3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	P4HA3	Q7Z4N8	544 aa		3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	GRAMD2A	Q8IUY3	354 aa		3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	SLC39A11	Q8N1S5	342 aa		3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	ZBED6CL	Q96FA7	236 aa	Predicted RBP	3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	TSPAN18	Q96SJ8	248 aa		3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	WRAP53	Q9BUR4	548 aa	Known RBP	3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	CARD6	Q9BX69	1037 aa		3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	TRPV5	Q9NQA5	729 aa		3.4	□□□□□ -1.87
CTNNA1-222	ENST00000520400	RBM28	Q9NW13	759 aa	Known RBP	3.4	□□□□□ -1.87

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