RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 ARPC2O15144 300 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 SLC25A12O75746 678 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 THBS1P07996 1170 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 SP1P08047 785 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 CD46P15529 392 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 IL7RP16871 459 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 ADH7P40394 386 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 PTGDSP41222 190 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 MS4A2Q01362 244 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 TRAP1Q12931 704 aaKnown RBP16.3■□□□□ 0.2
SDC2-205ENST00000520233 ELOAQ14241 798 aaKnown RBP16.3■□□□□ 0.2
SDC2-205ENST00000520233 FGFBP1Q14512 234 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 LIN52Q52LA3 116 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 ZNF311Q5JNZ3 666 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 SLC25A25Q6KCM7 469 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 SLC30A6Q6NXT4 461 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 HMGN2P46Q86SG4 172 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 ARMC8Q8IUR7 673 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 CATSPER1Q8NEC5 780 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 C9orf43Q8TAL5 461 aaPredicted RBP16.3■□□□□ 0.2
SDC2-205ENST00000520233 SLC26A7Q8TE54 656 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 WDR60Q8WVS4 1066 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 FAM162AQ96A26 154 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 TAMM41Q96BW9 452 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 CCDC124Q96CT7 223 aaKnown RBP16.3■□□□□ 0.2
SDC2-205ENST00000520233 OSBPL11Q9BXB4 747 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.3■□□□□ 0.2
SDC2-205ENST00000520233 KLRF1Q9NZS2 232 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 SEC14L3Q9UDX4 400 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 SLC7A8Q9UHI5 535 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 TP53TG5Q9Y2B4 290 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 PCDHGB6Q9Y5F9 930 aa16.3■□□□□ 0.2
SDC2-205ENST00000520233 EXPH5Q8NEV8 1989 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 H3BNH8 94 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 ADAM10O14672 748 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 DPM1O60762 260 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 ANGPTL1O95841 491 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 FAM87AP0C7U9 286 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 NID1P14543 1247 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 ENDOUP21128 410 aaKnown RBP16.29■□□□□ 0.2
SDC2-205ENST00000520233 CNR1P21554 472 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 PRKAR1BP31321 381 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 CRYBA2P53672 197 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 GAS1P54826 345 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 LARS2Q15031 903 aaKnown RBP16.29■□□□□ 0.2
SDC2-205ENST00000520233 ZSWIM7Q19AV6 140 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 LRRC23Q53EV4 343 aaPredicted RBP16.29■□□□□ 0.2
SDC2-205ENST00000520233 PRAMEF20Q5VT98 475 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 FNDC7Q5VTL7 733 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 BICRALQ6AI39 1079 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 DHRS4L2Q6PKH6 230 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 MARCH3Q86UD3 253 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 VRK2Q86Y07 508 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 CMIPQ8IY22 773 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 ZNF614Q8N883 585 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 BHLHE22Q8NFJ8 381 aaPredicted RBP16.29■□□□□ 0.2
SDC2-205ENST00000520233 OR52E4Q8NGH9 312 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 RASSF5Q8WWW0 418 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 UTP4Q969X6 686 aaKnown RBP16.29■□□□□ 0.2
SDC2-205ENST00000520233 SCMH1Q96GD3 660 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 C5orf34Q96MH7 638 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 FRMD6Q96NE9 622 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 PROK2Q9HC23 129 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 HHATLQ9HCP6 504 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 SDHAF3Q9NRP4 125 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 ZNF443Q9Y2A4 671 aaPredicted RBP16.29■□□□□ 0.2
SDC2-205ENST00000520233 CSAG2Q9Y5P2 127 aa16.29■□□□□ 0.2
SDC2-205ENST00000520233 TRAV17A0A0B4J275 112 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 ACOT8O14734 319 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 NDUFB5O43674 189 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 SCO2O43819 266 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 NME2P1O60361 137 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 SNX4O95219 450 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 STAMBPO95630 424 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 OPN1SWP03999 348 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 NME2P22392 152 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 CD97P48960 835 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 KCNJ2P63252 427 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 EEF1A1P68104 462 aaKnown RBP16.28■□□□□ 0.2
SDC2-205ENST00000520233 KCNJ10P78508 379 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 DMTNQ08495 405 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 CD226Q15762 336 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 ZNF766Q5HY98 468 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 RNF220Q5VTB9 566 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 LCN8Q6JVE9 175 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 ZNF836Q6ZNA1 936 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 Q6ZS92 163 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 ASB18Q6ZVZ8 466 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 DHFR2Q86XF0 187 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 MISPQ8IVT2 679 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 TMEM178AQ8NBL3 297 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 NSMCE2Q96MF7 247 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 RNF145Q96MT1 663 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 PINK1Q9BXM7 581 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 RSPO3Q9BXY4 272 aaPredicted RBP16.28■□□□□ 0.2
SDC2-205ENST00000520233 RTN4RQ9BZR6 473 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 ARMC7Q9H6L4 198 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 GALNT9Q9HCQ5 603 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 POMPQ9Y244 141 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 SLC35A3Q9Y2D2 325 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms