RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 C16orf58Q96GQ5 468 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 FAM111AQ96PZ2 611 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 NPAS1Q99742 590 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 NEUROD4Q9HD90 331 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 KLHL28Q9NXS3 571 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 C6orf203Q9P0P8 240 aaPredicted RBP11.18□□□□□ -0.62
CSMD1-205ENST00000519623 EIF3LQ9Y262 564 aaKnown RBP11.18□□□□□ -0.62
CSMD1-205ENST00000519623 TMED5Q9Y3A6 229 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 FIS1Q9Y3D6 152 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 TRAF6Q9Y4K3 522 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 HEATR5AQ86XA9 2040 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 PRR14LQ5THK1 2151 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 TMEM233B4DJY2 109 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 C16orf97H3BN30 126 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 NDUFB5O43674 189 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 EFNA1P20827 205 aaPredicted RBP11.17□□□□□ -0.62
CSMD1-205ENST00000519623 PSMA4P25789 261 aaKnown RBP11.17□□□□□ -0.62
CSMD1-205ENST00000519623 ALDH3A1P30838 453 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 CCKARP32238 428 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 SLC6A8P48029 635 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 RPS3AP61247 264 aaKnown RBP11.17□□□□□ -0.62
CSMD1-205ENST00000519623 RPL38P63173 70 aaKnown RBP11.17□□□□□ -0.62
CSMD1-205ENST00000519623 SIRPAP78324 504 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 MLC1Q15049 377 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 DUSP5Q16690 384 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 GALNTL6Q49A17 601 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 ARL13AQ5H913 290 aaPredicted RBP11.17□□□□□ -0.62
CSMD1-205ENST00000519623 MFSD12Q6NUT3 480 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 ZCCHC12Q6PEW1 402 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 FIGNL1Q6PIW4 674 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 GTPBP8Q8N3Z3 284 aaPredicted RBP11.17□□□□□ -0.62
CSMD1-205ENST00000519623 OR6Y1Q8NGX8 325 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 OR2W6PQ8NHA6 318 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 ZFP28Q8NHY6 868 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.17□□□□□ -0.62
CSMD1-205ENST00000519623 MTERF3Q96E29 417 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 ADGRG7Q96K78 797 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 MARK4Q96L34 752 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 KLHDC3Q9BQ90 382 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 SLC39A3Q9BRY0 314 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 IQCGQ9H095 443 aaKnown RBP11.17□□□□□ -0.62
CSMD1-205ENST00000519623 L2HGDHQ9H9P8 463 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 SIRT3Q9NTG7 399 aaPredicted RBP11.17□□□□□ -0.62
CSMD1-205ENST00000519623 BEX4Q9NWD9 120 aaPredicted RBP11.17□□□□□ -0.62
CSMD1-205ENST00000519623 MKS1Q9NXB0 559 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 ATP6V1HQ9UI12 483 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 MID2Q9UJV3 735 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 VDAC3Q9Y277 283 aa11.17□□□□□ -0.62
CSMD1-205ENST00000519623 A0A087WZY1 265 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 TLDC2A0PJX2 215 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 ADAMDEC1O15204 470 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 NPHS1O60500 1241 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 CHEK2O96017 543 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 OPN1LWP04000 364 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 POU2F1P14859 743 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 ZNF17P17021 662 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 IL11P20809 199 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 CRYGSP22914 178 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 LOXP28300 417 aaPredicted RBP11.16□□□□□ -0.62
CSMD1-205ENST00000519623 LCN1P31025 176 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 ARRB2P32121 409 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 ASMTP46597 345 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 FGFBP1Q14512 234 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 SGCBQ16585 318 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 CTU2Q2VPK5 515 aaKnown RBP11.16□□□□□ -0.62
CSMD1-205ENST00000519623 CPTPQ5TA50 214 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 FAM214BQ7L5A3 538 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 TRABD2AQ86V40 505 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 HOMEZQ8IX15 550 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 GATSQ8NAP1 163 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 FBXO30Q8TB52 745 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 ACTRT2Q8TDY3 377 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 NUDT8Q8WV74 236 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 TWIST2Q8WVJ9 160 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 FAM120BQ96EK7 910 aaKnown RBP11.16□□□□□ -0.62
CSMD1-205ENST00000519623 MS4A4EQ96PG1 132 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 MED18Q9BUE0 208 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 MECRQ9BV79 373 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 HHATLQ9HCP6 504 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 PLSCR4Q9NRQ2 329 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 UBQLN4Q9NRR5 601 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 ZNF226Q9NYT6 803 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 SLC17A7Q9P2U7 560 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 GIMAP2Q9UG22 337 aa11.16□□□□□ -0.62
CSMD1-205ENST00000519623 DSCAMO60469 2012 aa11.15□□□□□ -0.62
CSMD1-205ENST00000519623 A0A1W2PRB8 838 aa11.15□□□□□ -0.62
CSMD1-205ENST00000519623 C7orf72A4D263 438 aa11.15□□□□□ -0.62
CSMD1-205ENST00000519623 EIF1AYO14602 144 aaKnown RBP11.15□□□□□ -0.62
CSMD1-205ENST00000519623 PIP5K1BO14986 540 aa11.15□□□□□ -0.62
CSMD1-205ENST00000519623 HMGN2P05204 90 aaKnown RBP11.15□□□□□ -0.62
CSMD1-205ENST00000519623 ALOX5P09917 674 aa11.15□□□□□ -0.62
CSMD1-205ENST00000519623 LAMP1P11279 417 aa11.15□□□□□ -0.62
CSMD1-205ENST00000519623 EIF1AXP47813 144 aaKnown RBP11.15□□□□□ -0.62
CSMD1-205ENST00000519623 SERPINB4P48594 390 aa11.15□□□□□ -0.62
CSMD1-205ENST00000519623 RAC1P63000 192 aa11.15□□□□□ -0.62
CSMD1-205ENST00000519623 NKX6-1P78426 367 aaPredicted RBP11.15□□□□□ -0.62
CSMD1-205ENST00000519623 PLPPR5Q32ZL2 321 aa11.15□□□□□ -0.62
CSMD1-205ENST00000519623 CCNJQ5T5M9 372 aa11.15□□□□□ -0.62
CSMD1-205ENST00000519623 ANKRD34AQ69YU3 496 aa11.15□□□□□ -0.62
CSMD1-205ENST00000519623 LRIG3Q6UXM1 1119 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms