RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 DSCR4P56555 118 aaPredicted RBP17.09■□□□□ 0.33
CTNNA1-213ENST00000519113 PSPHP78330 225 aa17.09■□□□□ 0.33
CTNNA1-213ENST00000519113 TNK1Q13470 666 aa17.09■□□□□ 0.33
CTNNA1-213ENST00000519113 PDCD2Q16342 344 aaPredicted RBP17.09■□□□□ 0.33
CTNNA1-213ENST00000519113 SLC9B1Q4ZJI4 515 aa17.09■□□□□ 0.33
CTNNA1-213ENST00000519113 C10orf62Q5T681 223 aaPredicted RBP17.09■□□□□ 0.33
CTNNA1-213ENST00000519113 OR5M10Q6IEU7 315 aa17.09■□□□□ 0.33
CTNNA1-213ENST00000519113 HMBOX1Q6NT76 420 aa17.09■□□□□ 0.33
CTNNA1-213ENST00000519113 UBQLNLQ8IYU4 475 aa17.09■□□□□ 0.33
CTNNA1-213ENST00000519113 ZNF610Q8N9Z0 462 aa17.09■□□□□ 0.33
CTNNA1-213ENST00000519113 OR4K17Q8NGC6 315 aa17.09■□□□□ 0.33
CTNNA1-213ENST00000519113 FIG4Q92562 907 aa17.09■□□□□ 0.33
CTNNA1-213ENST00000519113 ATP6V1E2Q96A05 226 aa17.09■□□□□ 0.33
CTNNA1-213ENST00000519113 ADOQ96SZ5 270 aa17.09■□□□□ 0.33
CTNNA1-213ENST00000519113 CCDC28BQ9BUN5 200 aa17.09■□□□□ 0.33
CTNNA1-213ENST00000519113 NUF2Q9BZD4 464 aa17.09■□□□□ 0.33
CTNNA1-213ENST00000519113 KLHL4Q9C0H6 718 aa17.09■□□□□ 0.33
CTNNA1-213ENST00000519113 PROCRQ9UNN8 238 aa17.09■□□□□ 0.33
CTNNA1-213ENST00000519113 TRIM33Q9UPN9 1127 aa17.09■□□□□ 0.33
CTNNA1-213ENST00000519113 FIS1Q9Y3D6 152 aa17.09■□□□□ 0.33
CTNNA1-213ENST00000519113 ZNF175Q9Y473 711 aa17.09■□□□□ 0.33
CTNNA1-213ENST00000519113 SONP18583 2426 aaKnown RBP17.09■□□□□ 0.33
CTNNA1-213ENST00000519113 AZIN1O14977 448 aa17.08■□□□□ 0.32
CTNNA1-213ENST00000519113 KRT20P35900 424 aa17.08■□□□□ 0.32
CTNNA1-213ENST00000519113 NR1H2P55055 460 aa17.08■□□□□ 0.32
CTNNA1-213ENST00000519113 B3GALT5-AS1P59052 145 aa17.08■□□□□ 0.32
CTNNA1-213ENST00000519113 BNIP1Q12981 228 aa17.08■□□□□ 0.32
CTNNA1-213ENST00000519113 TRMT12Q53H54 448 aaKnown RBP17.08■□□□□ 0.32
CTNNA1-213ENST00000519113 METTL21CQ5VZV1 264 aa17.08■□□□□ 0.32
CTNNA1-213ENST00000519113 FRG2Q64ET8 278 aa17.08■□□□□ 0.32
CTNNA1-213ENST00000519113 ANKRD34AQ69YU3 496 aa17.08■□□□□ 0.32
CTNNA1-213ENST00000519113 PODNL1Q6PEZ8 512 aa17.08■□□□□ 0.32
CTNNA1-213ENST00000519113 ZNF704Q6ZNC4 412 aaPredicted RBP17.08■□□□□ 0.32
CTNNA1-213ENST00000519113 MILR1Q7Z6M3 343 aa17.08■□□□□ 0.32
CTNNA1-213ENST00000519113 KLHL29Q96CT2 875 aa17.08■□□□□ 0.32
CTNNA1-213ENST00000519113 FRG2BQ96QU4 278 aa17.08■□□□□ 0.32
CTNNA1-213ENST00000519113 MRPL1Q9BYD6 325 aaKnown RBP17.08■□□□□ 0.32
CTNNA1-213ENST00000519113 RNF122Q9H9V4 155 aa17.08■□□□□ 0.32
CTNNA1-213ENST00000519113 TCF7L2Q9NQB0 619 aa17.08■□□□□ 0.32
CTNNA1-213ENST00000519113 SAR1AQ9NR31 198 aa17.08■□□□□ 0.32
CTNNA1-213ENST00000519113 ZNF780BQ9Y6R6 833 aa17.08■□□□□ 0.32
CTNNA1-213ENST00000519113 ROS1P08922 2347 aa17.08■□□□□ 0.32
CTNNA1-213ENST00000519113 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.07■□□□□ 0.32
CTNNA1-213ENST00000519113 TMEM233B4DJY2 109 aa17.07■□□□□ 0.32
CTNNA1-213ENST00000519113 LINC01387J3KSC0 135 aa17.07■□□□□ 0.32
CTNNA1-213ENST00000519113 BCAS2O75934 225 aaPredicted RBP17.07■□□□□ 0.32
CTNNA1-213ENST00000519113 NID1P14543 1247 aa17.07■□□□□ 0.32
CTNNA1-213ENST00000519113 IL12BP29460 328 aa17.07■□□□□ 0.32
CTNNA1-213ENST00000519113 PKNOX1P55347 436 aa17.07■□□□□ 0.32
CTNNA1-213ENST00000519113 MRPS22P82650 360 aaKnown RBP17.07■□□□□ 0.32
CTNNA1-213ENST00000519113 KRTAP1-1Q07627 177 aa17.07■□□□□ 0.32
CTNNA1-213ENST00000519113 CAPRIN1Q14444 709 aaKnown RBP17.07■□□□□ 0.32
CTNNA1-213ENST00000519113 KRT72Q14CN4 511 aa17.07■□□□□ 0.32
CTNNA1-213ENST00000519113 FAM91A1Q658Y4 838 aa17.07■□□□□ 0.32
CTNNA1-213ENST00000519113 C22orf34Q6ZV56 151 aa17.07■□□□□ 0.32
CTNNA1-213ENST00000519113 GPRIN3Q6ZVF9 776 aa17.07■□□□□ 0.32
CTNNA1-213ENST00000519113 LARP4Q71RC2 724 aaKnown RBP eCLIP17.07■□□□□ 0.32
CTNNA1-213ENST00000519113 METTL4Q8N3J2 472 aa17.07■□□□□ 0.32
CTNNA1-213ENST00000519113 ZNF611Q8N823 705 aa17.07■□□□□ 0.32
CTNNA1-213ENST00000519113 BTBD9Q96Q07 612 aa17.07■□□□□ 0.32
CTNNA1-213ENST00000519113 ZNF382Q96SR6 550 aa17.07■□□□□ 0.32
CTNNA1-213ENST00000519113 PINK1Q9BXM7 581 aa17.07■□□□□ 0.32
CTNNA1-213ENST00000519113 NMUR2Q9GZQ4 415 aa17.07■□□□□ 0.32
CTNNA1-213ENST00000519113 NOL11Q9H8H0 719 aaKnown RBP17.07■□□□□ 0.32
CTNNA1-213ENST00000519113 USF3Q68DE3 2245 aa17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 NBEAL1Q6ZS30 2694 aa17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 GOLGA8QA0A0J9YX86 632 aa17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 GOLGA8OA6NCC3 632 aa17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 GOLGA8NF8WBI6 632 aa17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 KLF4O43474 513 aa17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 TSPAN2O60636 221 aa17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 SOX30O94993 753 aa17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 ESRRBO95718 433 aa17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 CHEK2O96017 543 aa17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 TP53P04637 393 aaPredicted RBP17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 PCSK2P16519 638 aa17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 NCF2P19878 526 aaPredicted RBP17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 CCNG1P51959 295 aa17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 BTKQ06187 659 aa17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 RAET1LQ5VY80 246 aa17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 KANK2Q63ZY3 851 aa17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 NXNQ6DKJ4 435 aa17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 FNDC9Q8TBE3 224 aa17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 PPP1R36Q96LQ0 422 aa17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 CDK15Q96Q40 435 aa17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 FAIM2Q9BWQ8 316 aa17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 WDR55Q9H6Y2 383 aaPredicted RBP17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 MEAF6Q9HAF1 191 aa17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 TNFRSF12AQ9NP84 129 aa17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 PFDN4Q9NQP4 134 aa17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 PPP4R1LQ9P1A2 415 aa17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 SLC12A4Q9UP95 1085 aa17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 CHD3Q12873 2000 aaKnown RBP17.06■□□□□ 0.32
CTNNA1-213ENST00000519113 ANK3Q12955 4377 aaKnown RBP17.05■□□□□ 0.32
CTNNA1-213ENST00000519113 PPP6CO00743 305 aa17.05■□□□□ 0.32
CTNNA1-213ENST00000519113 OR7A17O14581 309 aa17.05■□□□□ 0.32
CTNNA1-213ENST00000519113 HS3ST1O14792 307 aa17.05■□□□□ 0.32
CTNNA1-213ENST00000519113 SKAP2O75563 359 aaPredicted RBP17.05■□□□□ 0.32
CTNNA1-213ENST00000519113 OTCP00480 354 aa17.05■□□□□ 0.32
CTNNA1-213ENST00000519113 THBDP07204 575 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms