RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 WLSQ5T9L3 541 aa19.99■□□□□ 0.79
VEGFA-217ENST00000518538 MTFR2Q6P444 385 aa19.99■□□□□ 0.79
VEGFA-217ENST00000518538 OR14L1PQ8NHC6 308 aa19.99■□□□□ 0.79
VEGFA-217ENST00000518538 PNPT1Q8TCS8 783 aaKnown RBP19.99■□□□□ 0.79
VEGFA-217ENST00000518538 NMUR2Q9GZQ4 415 aa19.99■□□□□ 0.79
VEGFA-217ENST00000518538 TP63Q9H3D4 680 aaPredicted RBP19.99■□□□□ 0.79
VEGFA-217ENST00000518538 PTGES2Q9H7Z7 377 aa19.99■□□□□ 0.79
VEGFA-217ENST00000518538 POLE3Q9NRF9 147 aa19.99■□□□□ 0.79
VEGFA-217ENST00000518538 PNPLA3Q9NST1 481 aa19.99■□□□□ 0.79
VEGFA-217ENST00000518538 MRGBPQ9NV56 204 aa19.99■□□□□ 0.79
VEGFA-217ENST00000518538 TAS2R10Q9NYW0 307 aa19.99■□□□□ 0.79
VEGFA-217ENST00000518538 MED11Q9P086 117 aa19.99■□□□□ 0.79
VEGFA-217ENST00000518538 SUCOQ9UBS9 1254 aaKnown RBP19.99■□□□□ 0.79
VEGFA-217ENST00000518538 SLC6A5Q9Y345 797 aa19.99■□□□□ 0.79
VEGFA-217ENST00000518538 PCDHB14Q9Y5E9 798 aa19.99■□□□□ 0.79
VEGFA-217ENST00000518538 HIVEP3Q5T1R4 2406 aa19.98■□□□□ 0.79
VEGFA-217ENST00000518538 ZNF407Q9C0G0 2248 aa19.98■□□□□ 0.79
VEGFA-217ENST00000518538 A0A1W2PP18 115 aa19.98■□□□□ 0.79
VEGFA-217ENST00000518538 E9PLN8 166 aa19.98■□□□□ 0.79
VEGFA-217ENST00000518538 RNF224P0DH78 156 aa19.98■□□□□ 0.79
VEGFA-217ENST00000518538 ESRRAP11474 423 aaPredicted RBP19.98■□□□□ 0.79
VEGFA-217ENST00000518538 CD1EP15812 388 aa19.98■□□□□ 0.79
VEGFA-217ENST00000518538 HOXB9P17482 250 aaPredicted RBP19.98■□□□□ 0.79
VEGFA-217ENST00000518538 GCKP35557 465 aa19.98■□□□□ 0.79
VEGFA-217ENST00000518538 MVDP53602 400 aa19.98■□□□□ 0.79
VEGFA-217ENST00000518538 CRYZQ08257 329 aaKnown RBP19.98■□□□□ 0.79
VEGFA-217ENST00000518538 KLHL26Q53HC5 615 aa19.98■□□□□ 0.79
VEGFA-217ENST00000518538 COX20Q5RI15 118 aa19.98■□□□□ 0.79
VEGFA-217ENST00000518538 LRIF1Q5T3J3 769 aa19.98■□□□□ 0.79
VEGFA-217ENST00000518538 MTERF4Q7Z6M4 381 aaKnown RBP19.98■□□□□ 0.79
VEGFA-217ENST00000518538 GATSQ8NAP1 163 aa19.98■□□□□ 0.79
VEGFA-217ENST00000518538 OR5M9Q8NGP3 310 aa19.98■□□□□ 0.79
VEGFA-217ENST00000518538 ROPN1LQ96C74 230 aa19.98■□□□□ 0.79
VEGFA-217ENST00000518538 AURKBQ96GD4 344 aaPredicted RBP19.98■□□□□ 0.79
VEGFA-217ENST00000518538 VKORC1Q9BQB6 163 aa19.98■□□□□ 0.79
VEGFA-217ENST00000518538 FIGNL2A6NMB9 653 aa19.97■□□□□ 0.79
VEGFA-217ENST00000518538 FCMRO60667 390 aa19.97■□□□□ 0.79
VEGFA-217ENST00000518538 GPR68Q15743 365 aa19.97■□□□□ 0.79
VEGFA-217ENST00000518538 CD226Q15762 336 aa19.97■□□□□ 0.79
VEGFA-217ENST00000518538 PAGE3Q5JUK9 113 aa19.97■□□□□ 0.79
VEGFA-217ENST00000518538 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.97■□□□□ 0.79
VEGFA-217ENST00000518538 AP1ARQ63HQ0 302 aa19.97■□□□□ 0.79
VEGFA-217ENST00000518538 VASNQ6EMK4 673 aa19.97■□□□□ 0.79
VEGFA-217ENST00000518538 C3P1Q6ZMU1 363 aa19.97■□□□□ 0.79
VEGFA-217ENST00000518538 IFNEQ86WN2 208 aa19.97■□□□□ 0.79
VEGFA-217ENST00000518538 TSPEARQ8WU66 669 aa19.97■□□□□ 0.79
VEGFA-217ENST00000518538 C1GALT1C1Q96EU7 318 aa19.97■□□□□ 0.79
VEGFA-217ENST00000518538 CCDC120Q96HB5 630 aa19.97■□□□□ 0.79
VEGFA-217ENST00000518538 TIMP4Q99727 224 aa19.97■□□□□ 0.79
VEGFA-217ENST00000518538 MKLN1Q9UL63 735 aa19.97■□□□□ 0.79
VEGFA-217ENST00000518538 LIPT1Q9Y234 373 aa19.97■□□□□ 0.79
VEGFA-217ENST00000518538 WDR45Q9Y484 360 aa19.97■□□□□ 0.79
VEGFA-217ENST00000518538 DTNAQ9Y4J8 743 aa19.97■□□□□ 0.79
VEGFA-217ENST00000518538 BAHCC1Q9P281 2608 aa19.97■□□□□ 0.79
VEGFA-217ENST00000518538 GTF3C1Q12789 2109 aa19.96■□□□□ 0.79
VEGFA-217ENST00000518538 PRAMEF27A3QJZ7 478 aa19.96■□□□□ 0.79
VEGFA-217ENST00000518538 H3BNH8 94 aa19.96■□□□□ 0.79
VEGFA-217ENST00000518538 KIAA0513O60268 411 aa19.96■□□□□ 0.79
VEGFA-217ENST00000518538 ZIC3O60481 467 aa19.96■□□□□ 0.79
VEGFA-217ENST00000518538 ACTL6AO96019 429 aa19.96■□□□□ 0.79
VEGFA-217ENST00000518538 BMP7P18075 431 aa19.96■□□□□ 0.79
VEGFA-217ENST00000518538 MSX1P28360 303 aa19.96■□□□□ 0.79
VEGFA-217ENST00000518538 GFRA1P56159 465 aa19.96■□□□□ 0.79
VEGFA-217ENST00000518538 HPCAP84074 193 aa19.96■□□□□ 0.79
VEGFA-217ENST00000518538 ZNF141Q15928 474 aa19.96■□□□□ 0.79
VEGFA-217ENST00000518538 ZNF630Q2M218 657 aaPredicted RBP19.96■□□□□ 0.79
VEGFA-217ENST00000518538 GPAT3Q53EU6 434 aa19.96■□□□□ 0.79
VEGFA-217ENST00000518538 TYW3Q6IPR3 259 aaKnown RBP19.96■□□□□ 0.79
VEGFA-217ENST00000518538 OLIG3Q7RTU3 272 aa19.96■□□□□ 0.79
VEGFA-217ENST00000518538 PHOSPHO1Q8TCT1 267 aa19.96■□□□□ 0.79
VEGFA-217ENST00000518538 PHF10Q8WUB8 498 aaKnown RBP19.96■□□□□ 0.79
VEGFA-217ENST00000518538 C10orf82Q8WW14 230 aa19.96■□□□□ 0.79
VEGFA-217ENST00000518538 OIT3Q8WWZ8 545 aa19.96■□□□□ 0.79
VEGFA-217ENST00000518538 ABTB1Q969K4 478 aaPredicted RBP19.96■□□□□ 0.79
VEGFA-217ENST00000518538 TRNT1Q96Q11 434 aaKnown RBP19.96■□□□□ 0.79
VEGFA-217ENST00000518538 DMRTA2Q96SC8 542 aa19.96■□□□□ 0.79
VEGFA-217ENST00000518538 UGT2B28Q9BY64 529 aa19.96■□□□□ 0.79
VEGFA-217ENST00000518538 SAP130Q9H0E3 1048 aa19.96■□□□□ 0.79
VEGFA-217ENST00000518538 RAD21L1Q9H4I0 556 aa19.96■□□□□ 0.79
VEGFA-217ENST00000518538 SLC25A37Q9NYZ2 338 aa19.96■□□□□ 0.79
VEGFA-217ENST00000518538 LEF1Q9UJU2 399 aaPredicted RBP19.96■□□□□ 0.79
VEGFA-217ENST00000518538 DNAJC13O75165 2243 aa19.95■□□□□ 0.78
VEGFA-217ENST00000518538 CLIC1O00299 241 aa19.95■□□□□ 0.78
VEGFA-217ENST00000518538 ZG16O60844 167 aa19.95■□□□□ 0.78
VEGFA-217ENST00000518538 WDR1O75083 606 aa19.95■□□□□ 0.78
VEGFA-217ENST00000518538 H6PDO95479 791 aa19.95■□□□□ 0.78
VEGFA-217ENST00000518538 CRATP43155 626 aa19.95■□□□□ 0.78
VEGFA-217ENST00000518538 PDZK1Q5T2W1 519 aa19.95■□□□□ 0.78
VEGFA-217ENST00000518538 ZNF585AQ6P3V2 769 aa19.95■□□□□ 0.78
VEGFA-217ENST00000518538 AAGABQ6PD74 315 aa19.95■□□□□ 0.78
VEGFA-217ENST00000518538 FRRS1Q6ZNA5 592 aa19.95■□□□□ 0.78
VEGFA-217ENST00000518538 ZNF619Q8N2I2 560 aa19.95■□□□□ 0.78
VEGFA-217ENST00000518538 ZNF614Q8N883 585 aa19.95■□□□□ 0.78
VEGFA-217ENST00000518538 SFXN2Q96NB2 322 aa19.95■□□□□ 0.78
VEGFA-217ENST00000518538 PRDM14Q9GZV8 571 aa19.95■□□□□ 0.78
VEGFA-217ENST00000518538 THUMPD1Q9NXG2 353 aaKnown RBP19.95■□□□□ 0.78
VEGFA-217ENST00000518538 SLAMF8Q9P0V8 285 aa19.95■□□□□ 0.78
VEGFA-217ENST00000518538 KCNE5Q9UJ90 142 aa19.95■□□□□ 0.78
VEGFA-217ENST00000518538 RPH3AQ9Y2J0 694 aaPredicted RBP19.95■□□□□ 0.78
VEGFA-217ENST00000518538 NDUFAF1Q9Y375 327 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms