RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 A0A0G2JPF8 293 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 DBX1A6NMT0 343 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 MEIS3P2A8K0S8 358 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 HNRNPCL3B7ZW38 293 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 ADAM12O43184 909 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 NDUFS6O75380 124 aaKnown RBP12.01□□□□□ -0.49
SMAD1-215ENST00000515385 ATG12O94817 140 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 EGFP01133 1207 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 S100A9P06702 114 aaKnown RBP12.01□□□□□ -0.49
SMAD1-215ENST00000515385 RHOCP08134 193 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 HNRNPCL4P0DMR1 293 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 PVALBP20472 110 aaPredicted RBP12.01□□□□□ -0.49
SMAD1-215ENST00000515385 HOXA6P31267 233 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 CCR7P32248 378 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 VEGFCP49767 419 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 GPR143P51810 404 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 CHRNA6Q15825 494 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 ZNF791Q3KP31 576 aaPredicted RBP12.01□□□□□ -0.49
SMAD1-215ENST00000515385 FAM83HQ6ZRV2 1179 aaPredicted RBP12.01□□□□□ -0.49
SMAD1-215ENST00000515385 PRRT2Q7Z6L0 340 aaPredicted RBP12.01□□□□□ -0.49
SMAD1-215ENST00000515385 THOC6Q86W42 341 aaKnown RBP12.01□□□□□ -0.49
SMAD1-215ENST00000515385 ADGRG2Q8IZP9 1017 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 OR5AK3PQ8NH89 298 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 SLC38A5Q8WUX1 472 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 NR4A3Q92570 626 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 SUSD3Q96L08 255 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 TOX2Q96NM4 488 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 PAAF1Q9BRP4 392 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 SMG9Q9H0W8 520 aaKnown RBP12.01□□□□□ -0.49
SMAD1-215ENST00000515385 ANKRD19PQ9H560 264 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 DDX31Q9H8H2 851 aaKnown RBP12.01□□□□□ -0.49
SMAD1-215ENST00000515385 HRASLSQ9HDD0 168 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 TRIM36Q9NQ86 728 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 EXOSC3Q9NQT5 275 aaKnown RBP12.01□□□□□ -0.49
SMAD1-215ENST00000515385 TAS2R3Q9NYW6 316 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 ICKQ9UPZ9 632 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 PLXNA3P51805 1871 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 NLRC5Q86WI3 1866 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 A0A1B0GVC2 190 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 PMS2P1A4D2B8 440 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 A6NIN4 97 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 OR6C75A6NL08 312 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 CHURC1-FNTBB4DL54 471 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 H3BNC9 293 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 ARPC5O15511 151 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 ETHE1O95571 254 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 TBX18O95935 607 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 SERPINA3P01011 423 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 BCHEP06276 602 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 ATP6V1E1P36543 226 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 CCR8P51685 355 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 NR0B1P51843 470 aaKnown RBP12□□□□□ -0.49
SMAD1-215ENST00000515385 EEF1A1P68104 462 aaKnown RBP12□□□□□ -0.49
SMAD1-215ENST00000515385 CRHR2Q13324 411 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 PLEKHS1Q5SXH7 462 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 EEF1A1P5Q5VTE0 462 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 OR5M10Q6IEU7 315 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 ZNF467Q7Z7K2 595 aaPredicted RBP12□□□□□ -0.49
SMAD1-215ENST00000515385 IQCHQ86VS3 1027 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 MORN4Q8NDC4 146 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 BPIFCQ8NFQ6 507 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 DMBX1Q8NFW5 382 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 OR4F15Q8NGB8 312 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 SFT2D1Q8WV19 159 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 SKA2Q8WVK7 121 aaPredicted RBP12□□□□□ -0.49
SMAD1-215ENST00000515385 FBXO32Q969P5 355 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 NEURL3Q96EH8 262 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 TMEM19Q96HH6 336 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 KATNBL1Q9H079 304 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 OR10A4Q9H209 315 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 NMRK2Q9NPI5 230 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 H2AFY2Q9P0M6 372 aaPredicted RBP12□□□□□ -0.49
SMAD1-215ENST00000515385 NTMQ9P121 344 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 ZNF69Q9UC07 566 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 ERVK-19Q9WJR5 959 aa12□□□□□ -0.49
SMAD1-215ENST00000515385 ZFP37Q9Y6Q3 630 aaPredicted RBP12□□□□□ -0.49
SMAD1-215ENST00000515385 NUP214P35658 2090 aaPredicted RBP12□□□□□ -0.49
SMAD1-215ENST00000515385 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.99□□□□□ -0.49
SMAD1-215ENST00000515385 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.99□□□□□ -0.49
SMAD1-215ENST00000515385 TRAPPC13A5PLN9 417 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 WRBO00258 174 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 SULT1C2O00338 296 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 EIF1BO60739 113 aaKnown RBP11.99□□□□□ -0.49
SMAD1-215ENST00000515385 PRAMEF12O95522 483 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 F2P00734 622 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 ASGR2P07307 311 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 ACP5P13686 325 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 RPA2P15927 270 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 EIF1P41567 113 aaKnown RBP11.99□□□□□ -0.49
SMAD1-215ENST00000515385 TAS2R43P59537 309 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 ZNF177Q13360 481 aaPredicted RBP11.99□□□□□ -0.49
SMAD1-215ENST00000515385 VGLL4Q14135 290 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 SGCAQ16586 387 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 SYTL3Q4VX76 610 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 ATXN7L2Q5T6C5 722 aaPredicted RBP11.99□□□□□ -0.49
SMAD1-215ENST00000515385 HENMT1Q5T8I9 393 aaKnown RBP11.99□□□□□ -0.49
SMAD1-215ENST00000515385 FAM71E1Q6IPT2 247 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 SLC25A25Q6KCM7 469 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 ALKBH2Q6NS38 261 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 CD300LGQ6UXG3 332 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms