RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 ST3GAL2Q16842 350 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 TUSC1Q2TAM9 212 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 C3orf38Q5JPI3 329 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 FCRLBQ6BAA4 426 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 GPR139Q6DWJ6 353 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 TRILQ7L0X0 811 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 FGD2Q7Z6J4 655 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 FBXO15Q8NCQ5 510 aaPredicted RBP9.03□□□□□ -0.96
VCAN-210ENST00000513960 OR8D4Q8NGM9 314 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 SLC35G5Q96KT7 338 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 GPR137Q96N19 417 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 POLDIP3Q9BY77 421 aaKnown RBP9.03□□□□□ -0.96
VCAN-210ENST00000513960 RNF32Q9H0A6 362 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 ZFP64Q9NPA5 681 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 TEX10Q9NXF1 929 aaPredicted RBP9.03□□□□□ -0.96
VCAN-210ENST00000513960 FBXL2Q9UKC9 423 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 IRAK3Q9Y616 596 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 TRDV1A0A1B0GX56 115 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 SLC9B1P1A6NJY1 282 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 PDCD5O14737 125 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 MMP20O60882 483 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 RGS9O75916 674 aaPredicted RBP9.03□□□□□ -0.96
VCAN-210ENST00000513960 FURINP09958 794 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 UQCRC2P22695 453 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 AHRP35869 848 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 IFNGR2P38484 337 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 VEGFCP49767 419 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 GBX2P52951 348 aaPredicted RBP9.03□□□□□ -0.96
VCAN-210ENST00000513960 ERVK-21P61565 698 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 PUDPQ08623 228 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 CLLU1Q5K131 121 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 PLBD1Q6P4A8 553 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 METAP1DQ6UB28 335 aaPredicted RBP9.03□□□□□ -0.96
VCAN-210ENST00000513960 NXPE4Q6UWF7 544 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 FAM198BQ6UWH4 519 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 CPOQ8IVL8 374 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 VN1R2Q8NFZ6 395 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 GPR32P1Q8NGA4 272 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 TRIM43Q96BQ3 446 aaPredicted RBP9.03□□□□□ -0.96
VCAN-210ENST00000513960 MS4A3Q96HJ5 214 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 RBP7Q96R05 134 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 OR2M2Q96R28 347 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 TRMT61BQ9BVS5 477 aaKnown RBP9.03□□□□□ -0.96
VCAN-210ENST00000513960 PCDHB16Q9NRJ7 776 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 AHSPQ9NZD4 102 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 CHST2Q9Y4C5 530 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 FZD7O75084 574 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 C8orf89P0DMQ9 161 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 AHCYP23526 432 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 NOS3P29474 1203 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 FAAP20Q6NZ36 180 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 SLITRK4Q8IW52 837 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 OR4D11Q8NGI4 311 aa9.03□□□□□ -0.96
VCAN-210ENST00000513960 ISG20L2Q9H9L3 353 aaKnown RBP9.03□□□□□ -0.96
VCAN-210ENST00000513960 K7ESM1 405 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 DPM1O60762 260 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 LIMS3P0CW19 117 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 LIMS4P0CW20 117 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 EPCAMP16422 314 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 SLC6A1P30531 599 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 CLCNKAP51800 687 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 BTG1P62324 171 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 TPBGQ13641 420 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 OCLNQ16625 522 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 SFRP5Q5T4F7 317 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 C12orf73Q69YU5 71 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 ELP2Q6IA86 826 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 LRRC28Q86X40 367 aaPredicted RBP9.02□□□□□ -0.97
VCAN-210ENST00000513960 LIX1LQ8IVB5 337 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 RAD51AP1Q96B01 352 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 PPP1R16AQ96I34 528 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 F2RL3Q96RI0 385 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 ABHD1Q96SE0 405 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 PRDM9Q9NQV7 894 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 SCP2D1Q9UJQ7 156 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 RCE1Q9Y256 329 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 OR6C74A6NCV1 312 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 OR5K3A6NET4 321 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 LRRN3E7EW58 273 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 SGK494L7N484 410 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 FMO6PO60774 539 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 PPM1BO75688 479 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 RRASP10301 218 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 C6P13671 934 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 NAGAP17050 411 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 POU3F2P20265 443 aaPredicted RBP9.02□□□□□ -0.97
VCAN-210ENST00000513960 SELENOPP49908 381 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 RGS8P57771 180 aaPredicted RBP9.02□□□□□ -0.97
VCAN-210ENST00000513960 STXBP1P61764 594 aaKnown RBP9.02□□□□□ -0.97
VCAN-210ENST00000513960 STX4Q12846 297 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 PRAMEF14Q5SWL7 426 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 PRAMEF13Q5VWM6 474 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 ZNF614Q8N883 585 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 FAM181AQ8N9Y4 354 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 OR6T1Q8NGN1 323 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 PIGXQ8TBF5 258 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 COL26A1Q96A83 441 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 ZNF354BQ96LW1 612 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 FAIM2Q9BWQ8 316 aa9.02□□□□□ -0.97
VCAN-210ENST00000513960 SGPP1Q9BX95 441 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms