RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 GMEB1Q9Y692 573 aa10.35□□□□□ -0.75
HTT-213ENST00000513806 MPDZO75970 2070 aa10.35□□□□□ -0.75
HTT-213ENST00000513806 SPTA1P02549 2419 aa10.35□□□□□ -0.75
HTT-213ENST00000513806 SHISA8B8ZZ34 492 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 C5orf58C9J3I9 102 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 CDC40O60508 579 aaKnown RBP eCLIP10.34□□□□□ -0.751e-6■■■■■ 30.2
HTT-213ENST00000513806 TRIM3O75382 744 aaPredicted RBP10.34□□□□□ -0.75
HTT-213ENST00000513806 RASAL1O95294 804 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 PGM3O95394 542 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 AGR2O95994 175 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 AK1P00568 194 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 NPPAP01160 153 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 SFTPCP11686 197 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 NCK1P16333 377 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 TCN1P20061 433 aaPredicted RBP10.34□□□□□ -0.75
HTT-213ENST00000513806 CALB2P22676 271 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 MST1P26927 711 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 MAGEA5P43359 124 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 MASP1P48740 699 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 ANXA11P50995 505 aaKnown RBP10.34□□□□□ -0.75
HTT-213ENST00000513806 ATP12AP54707 1039 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 HPCAP84074 193 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 FOXK1P85037 733 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 PLGLB1Q02325 96 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 GLIPR1L2Q4G1C9 344 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 KLHL26Q53HC5 615 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 ZNF836Q6ZNA1 936 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 NET1Q7Z628 596 aaPredicted RBP10.34□□□□□ -0.75
HTT-213ENST00000513806 DND1Q8IYX4 353 aaKnown RBP10.34□□□□□ -0.75
HTT-213ENST00000513806 WDSUB1Q8N9V3 476 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 OR10Q1Q8NGQ4 319 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 PHOSPHO1Q8TCT1 267 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 ZNF524Q96C55 264 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 NTNG2Q96CW9 530 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 SNRNP40Q96DI7 357 aaKnown RBP10.34□□□□□ -0.75
HTT-213ENST00000513806 CLPTM1LQ96KA5 538 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 CDRT15Q96T59 188 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 NPAS1Q99742 590 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 FAM173AQ9BQD7 235 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 TTTY12Q9BZ98 90 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 SAP130Q9H0E3 1048 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 DEFB127Q9H1M4 99 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 DSN1Q9H410 356 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 UBQLN4Q9NRR5 601 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 ASF1BQ9NVP2 202 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 CNIH4Q9P003 139 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 PPP4R1LQ9P1A2 415 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 TMEM181Q9P2C4 612 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 CORO2BQ9UQ03 480 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 LIPT1Q9Y234 373 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 CARD8Q9Y2G2 431 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 LIPGQ9Y5X9 500 aa10.34□□□□□ -0.75
HTT-213ENST00000513806 PRORSD1PA6NEY8 169 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 TTLL8A6PVC2 850 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 FAM220BPB1ANY3 271 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 KLRC4-KLRK1H3BQV0 150 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 PYCARD-AS1I3L0S3 204 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 SCDO00767 359 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 SNPHO15079 494 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 FRS3O43559 492 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 NDUFB5O43674 189 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 TPST1O60507 370 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 CYP7B1O75881 506 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 PDE5AO76074 875 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 PDE9AO76083 593 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 WISP1O95388 367 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 HPGDP15428 266 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 CRISP3P54108 245 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 PPIAP62937 165 aaKnown RBP10.33□□□□□ -0.76
HTT-213ENST00000513806 RPP38P78345 283 aaKnown RBP10.33□□□□□ -0.76
HTT-213ENST00000513806 HSF1Q00613 529 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 ZNF117Q03924 483 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 ZNF141Q15928 474 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 VMACQ2NL98 169 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 REEP3Q6NUK4 255 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 SLC30A6Q6NXT4 461 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 CBLN3Q6UW01 205 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 SERPINA11Q86U17 422 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 HPS6Q86YV9 775 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 MICU2Q8IYU8 434 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 PGAM4Q8N0Y7 254 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 TMEM251Q8N6I4 163 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 SMYD1Q8NB12 490 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 C11orf65Q8NCR3 313 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 OR5M1Q8NGP8 315 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 OR52P1PQ8NH57 321 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 WDR60Q8WVS4 1066 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 CNOT9Q92600 299 aaKnown RBP10.33□□□□□ -0.76
HTT-213ENST00000513806 RELTQ969Z4 430 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 SLC7A6OSQ96CW6 309 aaPredicted RBP10.33□□□□□ -0.76
HTT-213ENST00000513806 ZNF597Q96LX8 424 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 SECISBP2Q96T21 854 aaKnown RBP10.33□□□□□ -0.76
HTT-213ENST00000513806 SH3GL1Q99961 368 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 HOPXQ9BPY8 73 aaPredicted RBP10.33□□□□□ -0.76
HTT-213ENST00000513806 WFDC6Q9BQY6 131 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 TMEM38AQ9H6F2 299 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 RLIMQ9NVW2 624 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 TAS2R1Q9NYW7 299 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 ABCD2Q9UBJ2 740 aa10.33□□□□□ -0.76
HTT-213ENST00000513806 EGFL7Q9UHF1 273 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms