RNA–Protein interactions for RNA: ENST00000513636.1

ATP2C1-220, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-220ENST00000513636 SNAPC3Q92966 411 aa3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 NXNL1Q96CM4 212 aa3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 CXorf40BQ96DE9 158 aa3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 PDLIM5Q96HC4 596 aaKnown RBP3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 POM121L2Q96KW2 1035 aa3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 UBXN10Q96LJ8 280 aa3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 FAM111AQ96PZ2 611 aa3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 CMKLR1Q99788 373 aa3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 ELAC2Q9BQ52 826 aaKnown RBP3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 MRPL57Q9BQC6 102 aaKnown RBP3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 HAUS8Q9BT25 410 aa3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 MCRIP2Q9BUT9 160 aaKnown RBP3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 GTPBP2Q9BX10 602 aaKnown RBP3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 SLC32A1Q9H598 525 aa3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 STN1Q9H668 368 aaKnown RBP3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 CHODLQ9H9P2 273 aa3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 NMRAL1Q9HBL8 299 aa3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 WASH6PQ9NQA3 447 aa3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 IMP3Q9NV31 184 aaKnown RBP3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 FAM120CQ9NX05 1096 aaKnown RBP3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 UTP6Q9NYH9 597 aaKnown RBP3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 NKIRAS1Q9NYS0 192 aa3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 NUDT4Q9NZJ9 180 aa3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 CPSF2Q9P2I0 782 aaKnown RBP3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 TBC1D29Q9UFV1 150 aa3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 IKZF3Q9UKT9 509 aa3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 EMCNQ9ULC0 261 aa3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 ACSL5Q9ULC5 683 aa3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 GRID1Q9ULK0 1009 aa3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 ASF1AQ9Y294 204 aa3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 OARD1Q9Y530 152 aa3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 HEBP2Q9Y5Z4 205 aa3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 CHD8Q9HCK8 2581 aa3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 ANKRD11Q6UB99 2663 aaPredicted RBP3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 PTPRQQ9UMZ3 2332 aa3.13□□□□□ -1.91
ATP2C1-220ENST00000513636 NEMP2A6NFY4 417 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 NCF1BA6NI72 391 aaPredicted RBP3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 SYCE1LA8MT33 242 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 NCF1CA8MVU1 366 aaPredicted RBP3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 E9PQ18 207 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 GFYI3L273 518 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 DFNA5O60443 496 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 C1orf105O95561 183 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 GUCA1CO95843 209 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 IGHV4-39P01824 125 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 RPS17P08708 135 aaKnown RBP3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 ANXA5P08758 320 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 ZNF806P0C7X5 589 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 GIMD1P0DJR0 217 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 MYL2P10916 166 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 ERGP11308 486 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 NCF1P14598 390 aaPredicted RBP3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 TAC1P20366 129 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 ACADLP28330 430 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 IMPA1P29218 277 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 RPA3P35244 121 aaPredicted RBP3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 DCTP40126 519 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 EIF2S3P41091 472 aaKnown RBP3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 GRK6P43250 576 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 FASLGP48023 281 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 RAB28P51157 221 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 TBPL1P62380 186 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 CDKL1Q00532 357 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 ABRQ12979 859 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 TSTA3Q13630 321 aaPredicted RBP3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 KRT33BQ14525 404 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 HLA-BQ31612 363 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 CCSMST1Q4G0I0 132 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 C14orf28Q4W4Y0 310 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 FBXO48Q5FWF7 155 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 HHATQ5VTY9 493 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 ABRAXAS1Q6UWZ7 409 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 ZYG11AQ6WRX3 759 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 LRRC70Q7Z2Q7 622 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 TRPT1Q86TN4 253 aaKnown RBP3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 ISCA2Q86U28 154 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 SLC22A9Q8IVM8 553 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 TBC1D21Q8IYX1 336 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 TCAIMQ8N3R3 496 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 SFRP1Q8N474 314 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 FBXO39Q8N4B4 442 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 RAB42Q8N4Z0 105 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 ARFGAP2Q8N6H7 521 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 ARL10Q8N8L6 244 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 OR52E1Q8NGJ3 308 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 OR9A1PQ8NGU1 263 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 RHEBL1Q8TAI7 183 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 STAG3L4Q8TBR4 150 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 RDH11Q8TC12 318 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 MCOLN3Q8TDD5 553 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 TCP10LQ8TDR4 215 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 SAP25Q8TEE9 199 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 DYDC1Q8WWB3 177 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 ATL1Q8WXF7 558 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 RAD51AP1Q96B01 352 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 TMEM237Q96Q45 408 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 RBM4BQ9BQ04 359 aaKnown RBP3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 RAB11FIP5Q9BXF6 653 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 KIR3DX1Q9H7L2 352 aa3.12□□□□□ -1.91
ATP2C1-220ENST00000513636 CNOT10Q9H9A5 744 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms