RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 ACOT7O00154 380 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 OR7A17O14581 309 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 STATHP02808 62 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 PGAM2P15259 253 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 PTNP21246 168 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 CD9P21926 228 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 TACR1P25103 407 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 CD34P28906 385 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 PDHA2P29803 388 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 ETV6P41212 452 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 GPR4P46093 362 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 MC1RQ01726 317 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 MEF2AQ02078 507 aaPredicted RBP10.61□□□□□ -0.71
TCOF1-211ENST00000513346 ILKQ13418 452 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 AANATQ16613 207 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 HBMQ6B0K9 141 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 MTFR2Q6P444 385 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 TM9SF4Q92544 642 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 OR2A14Q96R47 310 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 SPNS1Q9H2V7 528 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 ABRACLQ9P1F3 81 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 CLEC2DQ9UHP7 191 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 WRBO00258 174 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 INHBBP09529 407 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 TRIM23P36406 574 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 BTN3A2P78410 334 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 CRYZQ08257 329 aaKnown RBP10.61□□□□□ -0.71
TCOF1-211ENST00000513346 GPR50Q13585 617 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 RUNX3Q13761 415 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 ZNF169Q14929 603 aaPredicted RBP10.61□□□□□ -0.71
TCOF1-211ENST00000513346 RPS26P11Q5JNZ5 115 aaPredicted RBP10.61□□□□□ -0.71
TCOF1-211ENST00000513346 HES5Q5TA89 166 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 SLC8B1Q6J4K2 584 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 TMEM205Q6UW68 189 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 IL20RBQ6UXL0 311 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 SLC22A15Q8IZD6 547 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 JAGN1Q8N5M9 183 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 OR5D16Q8NGK9 328 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 OR1J4Q8NGS1 313 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 SLC7A13Q8TCU3 470 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 BRIX1Q8TDN6 353 aaKnown RBP10.61□□□□□ -0.71
TCOF1-211ENST00000513346 C16orf78Q8WTQ4 265 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 METTL2AQ96IZ6 378 aaKnown RBP10.61□□□□□ -0.71
TCOF1-211ENST00000513346 SFXN2Q96NB2 322 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 RHNO1Q9BSD3 238 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 TMEM184CQ9NVA4 438 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 BABAM2Q9NXR7 383 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 GSKIPQ9P0R6 139 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 LAMTOR5O43504 91 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 SCO2O43819 266 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 UGDHO60701 494 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 SCGNO76038 276 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 GIMD1P0DJR0 217 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 S100A11P31949 105 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 TGM4P49221 684 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 RPS21P63220 83 aaKnown RBP10.6□□□□□ -0.71
TCOF1-211ENST00000513346 EXOSC2Q13868 293 aaKnown RBP10.6□□□□□ -0.71
TCOF1-211ENST00000513346 PUM1Q14671 1186 aaKnown RBP eCLIP10.6□□□□□ -0.714e-7■■■□□ 18.8
TCOF1-211ENST00000513346 ACSM3Q53FZ2 586 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 TMEM25Q86YD3 366 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 NLGN4XQ8N0W4 816 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 OR10K1Q8NGX5 313 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 ARRDC2Q8TBH0 407 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 SCARB1Q8WTV0 552 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 AK6Q9Y3D8 172 aaKnown RBP10.6□□□□□ -0.71
TCOF1-211ENST00000513346 ACTL7AQ9Y615 435 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 TSPAN6O43657 245 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 TYRP1P17643 537 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 GPX2P18283 190 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 ADH6P28332 368 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 CLDN20P56880 219 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 FXYD6P3P58550 94 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 GALK2Q01415 458 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 ARFRP1Q13795 201 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 GPR176Q14439 515 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 SLC14A2Q15849 920 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 RAB41Q5JT25 222 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 COMMD6Q7Z4G1 85 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 HMGN2P46Q86SG4 172 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 GKN2Q86XP6 184 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 APCDD1Q8J025 514 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 KLHDC9Q8NEP7 349 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 SETD7Q8WTS6 366 aaKnown RBP10.6□□□□□ -0.71
TCOF1-211ENST00000513346 MOAP1Q96BY2 351 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 JSRP1Q96MG2 331 aaPredicted RBP10.6□□□□□ -0.71
TCOF1-211ENST00000513346 TMEM43Q9BTV4 400 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 ZNF700Q9H0M5 742 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 DNTTIP1Q9H147 329 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 IFT22Q9H7X7 185 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 KCNK12Q9HB15 430 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 SLAMF7Q9NQ25 335 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 IL17CQ9P0M4 197 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 LIPT1Q9Y234 373 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 RCE1Q9Y256 329 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 MYO10Q9HD67 2058 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 TRDV1A0A1B0GX56 115 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 M0R3H8 397 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 RFXAPO00287 272 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 ATXN1LP0C7T5 689 aaKnown RBP10.6□□□□□ -0.71
TCOF1-211ENST00000513346 PIPP12273 146 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms