RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 BLMHQ13867 455 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 RPS6KA1Q15418 735 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 ZNF791Q3KP31 576 aaPredicted RBP3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 FASTKD1Q53R41 847 aaKnown RBP3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 PIGGQ5H8A4 983 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 FAM120AOSQ5T036 256 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 FAM182AQ5T1J6 154 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 ABLIM2Q6H8Q1 611 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 FAM166AQ6J272 317 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 ZNF549Q6P9A3 640 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 ENPP6Q6UWR7 440 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 PTCHD4Q6ZW05 846 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 H2AFVQ71UI9 128 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 ADCK2Q7Z695 626 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 LINC00523Q86TU6 105 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 LDB1Q86U70 411 aaPredicted RBP3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 PLD3Q8IV08 490 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 TBC1D19Q8N5T2 526 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 MFSD9Q8NBP5 474 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 OR5T3Q8NGG3 340 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 OR14A16Q8NHC5 309 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 B4GALNT2Q8NHY0 566 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 GABPB2Q8TAK5 448 aaPredicted RBP3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 NUBPLQ8TB37 319 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 SKA2Q8WVK7 121 aaPredicted RBP3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 ANKRD7Q92527 254 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 ABTB1Q969K4 478 aaPredicted RBP3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 INTS12Q96CB8 462 aaKnown RBP3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 STARD4Q96DR4 205 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 HS6ST2Q96MM7 605 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 TBL1YQ9BQ87 522 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 ANP32EQ9BTT0 268 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 NPLQ9BXD5 320 aaPredicted RBP3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 UGT2B28Q9BY64 529 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 OR10A4Q9H209 315 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 UBQLN3Q9H347 655 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 ADAP2Q9NPF8 381 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 NGBQ9NPG2 151 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 TAC3Q9UHF0 121 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 KCNS2Q9ULS6 477 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 CAMK2AQ9UQM7 478 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 LIPT1Q9Y234 373 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 MRPS33Q9Y291 106 aaKnown RBP3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 DTNAQ9Y4J8 743 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 MALRD1Q5VYJ5 2156 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 VWFP04275 2813 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 KMT2CQ8NEZ4 4911 aaKnown RBP3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 A0A096LNT2 108 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 CCDC162PA2VCL2 907 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 A8MUA0 341 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 G3V3Y1 287 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 H3BMM5 538 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 GFYI3L273 518 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 TP53I11O14683 189 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 PFDN6O15212 129 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 EMC8O43402 210 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 ZBTB14O43829 449 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 PRKNO60260 465 aaPredicted RBP3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 LCMT2O60294 686 aaKnown RBP3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 CTNSO60931 367 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 TRAPPC6AO75865 159 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 WDR47O94967 919 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 ACSL3O95573 720 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 SLC16A8O95907 504 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 IGKV3-20P01619 116 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 IGHV4-39P01824 125 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 SMIM10L1P0DMW3 83 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 TMEM225BP0DP42 221 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 CREB1P16220 341 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 ADRA1DP25100 572 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 CTNNA2P26232 953 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 GDF1P27539 372 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 AHRP35869 848 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 GJC1P36383 396 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 SKIV2L2P42285 1042 aaKnown RBP3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 SLC1A1P43005 524 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 SLCO1A2P46721 670 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 TRPC1P48995 793 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 KRTAP10-12P60413 245 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 ID2Q02363 134 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 RGS1Q08116 209 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 FUT7Q11130 342 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 SCGB2A2Q13296 93 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 RCN2Q14257 317 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 CSHL1Q14406 222 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 SPARCL1Q14515 664 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 BCL2A1Q16548 175 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 PARP6Q2NL67 630 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 DPCR1Q3MIW9 517 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 DEFB134Q4QY38 66 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 PTRHD1Q6GMV3 140 aaKnown RBP3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 CASC4Q6P4E1 433 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 ALKBH5Q6P6C2 394 aaKnown RBP3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 ZNF474Q6S9Z5 364 aaPredicted RBP3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 AFTPHQ6ULP2 937 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 CLEC2AQ6UVW9 174 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 MFSD7Q6UXD7 560 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 COLCA1Q6ZS62 124 aa3.26□□□□□ -1.89
PDLIM5-218ENST00000513341 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms