RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 TESK2Q96S53 571 aa2.55□□□□□ -2
TRAPPC11-207ENST00000511409 FEM1AQ9BSK4 669 aa2.55□□□□□ -2
TRAPPC11-207ENST00000511409 MRPL13Q9BYD1 178 aaKnown RBP2.55□□□□□ -2
TRAPPC11-207ENST00000511409 IKZF5Q9H5V7 419 aa2.55□□□□□ -2
TRAPPC11-207ENST00000511409 PALMDQ9NP74 551 aa2.55□□□□□ -2
TRAPPC11-207ENST00000511409 PNO1Q9NRX1 252 aaKnown RBP2.55□□□□□ -2
TRAPPC11-207ENST00000511409 TNFRSF19Q9NS68 423 aa2.55□□□□□ -2
TRAPPC11-207ENST00000511409 Q9UF83 564 aa2.55□□□□□ -2
TRAPPC11-207ENST00000511409 CLEC4EQ9ULY5 219 aa2.55□□□□□ -2
TRAPPC11-207ENST00000511409 TP53TG3Q9ULZ0 132 aa2.55□□□□□ -2
TRAPPC11-207ENST00000511409 B9D1Q9UPM9 204 aa2.55□□□□□ -2
TRAPPC11-207ENST00000511409 PPIAL4AQ9Y536 164 aa2.55□□□□□ -2
TRAPPC11-207ENST00000511409 KLF18A0A0U1RQI7 1052 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 OR6C65A6NJZ3 312 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 FCN1O00602 326 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 TNFSF11O14788 317 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 STX7O15400 261 aaKnown RBP2.54□□□□□ -2
TRAPPC11-207ENST00000511409 NUDT21O43809 227 aaKnown RBP2.54□□□□□ -2
TRAPPC11-207ENST00000511409 MFN2O95140 757 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 GUCA1CO95843 209 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 KRT6BP04259 564 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 HBQ1P09105 142 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 TSPY4P0CV99 314 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 TSPY10P0CW01 314 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 KRT6CP48668 564 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 RPL32P62910 135 aaKnown RBP2.54□□□□□ -2
TRAPPC11-207ENST00000511409 RPL8P62917 257 aaKnown RBP2.54□□□□□ -2
TRAPPC11-207ENST00000511409 IGLV3-21P80748 117 aaPredicted RBP2.54□□□□□ -2
TRAPPC11-207ENST00000511409 ZNF154Q13106 437 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 LINC01620Q4KN68 170 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 DNAJC21Q5F1R6 531 aaKnown RBP2.54□□□□□ -2
TRAPPC11-207ENST00000511409 CELF3Q5SZQ8 465 aaKnown RBP2.54□□□□□ -2
TRAPPC11-207ENST00000511409 STAC2Q6ZMT1 411 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 TMEM17Q86X19 198 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 C9orf40Q8IXQ3 194 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 M1APQ8TC57 530 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 IL1F10Q8WWZ1 152 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 TMEM80Q96HE8 168 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 MAPKAP1Q9BPZ7 522 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 PAXXQ9BUH6 204 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 TPPP3Q9BW30 176 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 FARSBQ9NSD9 589 aaKnown RBP2.54□□□□□ -2
TRAPPC11-207ENST00000511409 SLC35D1Q9NTN3 355 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.54□□□□□ -2
TRAPPC11-207ENST00000511409 MRPL39Q9NYK5 338 aaKnown RBP2.54□□□□□ -2
TRAPPC11-207ENST00000511409 CYTH4Q9UIA0 394 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 XPO7Q9UIA9 1087 aaKnown RBP2.54□□□□□ -2
TRAPPC11-207ENST00000511409 SH3BGRL2Q9UJC5 107 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 L3MBTL1Q9Y468 752 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 FLVCR1Q9Y5Y0 555 aa2.54□□□□□ -2
TRAPPC11-207ENST00000511409 TP53BP1Q12888 1972 aaPredicted RBP2.54□□□□□ -2
TRAPPC11-207ENST00000511409 A0A1B0GVY2 172 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 CLDN5O00501 218 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 HAT1O14929 419 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 PEX11AO75192 247 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 ZNF254O75437 659 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 IDH1O75874 414 aaKnown RBP2.53□□□□□ -2
TRAPPC11-207ENST00000511409 CHRNA1P02708 482 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 PCCBP05166 539 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 CD55P08174 381 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 ASNSP08243 561 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 GIG44P09565 113 aaPredicted RBP2.53□□□□□ -2
TRAPPC11-207ENST00000511409 ZBTB25P24278 435 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 UGT1A3P35503 534 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 BDKRB1P46663 353 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 OR3A4PP47883 348 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 MEOX2P50222 304 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 P2RY4P51582 365 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 RND3P61587 244 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 VLDLRP98155 873 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 BCL2L1Q07817 233 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 KLHL30Q0D2K2 578 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 ST3GAL3Q11203 375 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 ATXN7L3Q14CW9 347 aaPredicted RBP2.53□□□□□ -2
TRAPPC11-207ENST00000511409 TMEM52BQ4KMG9 183 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 UTF1Q5T230 341 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 RIPPLY2Q5TAB7 128 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 ACSM5Q6NUN0 579 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 UFSP1Q6NVU6 142 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 ANKRD37Q7Z713 158 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 KIAA1328Q86T90 577 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 APOBEC3FQ8IUX4 373 aaKnown RBP2.53□□□□□ -2
TRAPPC11-207ENST00000511409 FBXO16Q8IX29 292 aaPredicted RBP2.53□□□□□ -2
TRAPPC11-207ENST00000511409 FBXL16Q8N461 479 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 FADS6Q8N9I5 356 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 OR9A4Q8NGU2 314 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 OR10T2Q8NGX3 314 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 THRSPQ92748 146 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 MYLPFQ96A32 169 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 SYAP1Q96A49 352 aaPredicted RBP2.53□□□□□ -2
TRAPPC11-207ENST00000511409 FAF2Q96CS3 445 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 VSIG2Q96IQ7 327 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 C4orf36Q96KX1 117 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 GPA33Q99795 319 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 SLC30A2Q9BRI3 323 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 DPH7Q9BTV6 452 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 CRNKL1Q9BZJ0 848 aaKnown RBP2.53□□□□□ -2
TRAPPC11-207ENST00000511409 CALHM2Q9HA72 323 aa2.53□□□□□ -2
TRAPPC11-207ENST00000511409 PAK1IP1Q9NWT1 392 aaPredicted RBP2.53□□□□□ -2
TRAPPC11-207ENST00000511409 TMOD2Q9NZR1 351 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms