RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 HCN1O60741 890 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 TRAPPC6AO75865 159 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 HPNP05981 417 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 BCHEP06276 602 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 NPIPA8P0DM63 369 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 COX4I1P13073 169 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 GPX2P18283 190 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 MSX1P28360 303 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 SRD5A2P31213 254 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 MRPL49Q13405 166 aaKnown RBP11.72□□□□□ -0.53
COL6A6-203ENST00000511332 ZNF141Q15928 474 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 SYPL1Q16563 259 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 ZNF630Q2M218 657 aaPredicted RBP11.72□□□□□ -0.53
COL6A6-203ENST00000511332 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.72□□□□□ -0.53
COL6A6-203ENST00000511332 RUNDC3AQ59EK9 446 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 GCNT6Q5T4J0 391 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 PRAMEF8Q5VWM4 474 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 PRAMEF7Q5VXH5 474 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 TYW3Q6IPR3 259 aaKnown RBP11.72□□□□□ -0.53
COL6A6-203ENST00000511332 APOOLQ6UXV4 268 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 FRRS1Q6ZNA5 592 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 LRRC74BQ6ZQY2 392 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 ANKS4BQ8N8V4 417 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 FADS6Q8N9I5 356 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 WDSUB1Q8N9V3 476 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 GATSQ8NAP1 163 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 CMTM5Q96DZ9 223 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 ANKRD27Q96NW4 1050 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 LRRC37BQ96QE4 947 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 SH3GL1Q99961 368 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 SAP130Q9H0E3 1048 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 DEFB127Q9H1M4 99 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 LDAHQ9H6V9 325 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 EXO5Q9H790 373 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 ACKR4Q9NPB9 350 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 A4GALTQ9NPC4 353 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 DKKL1Q9UK85 242 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 MKLN1Q9UL63 735 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 DTNAQ9Y4J8 743 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 ESPL1Q14674 2120 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 PCNX3Q9H6A9 2034 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 C15orf38-AP3S2A0A0A6YYH1 394 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 TRGV5A0A0B4J1U4 118 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 LOC100653049A0A140TA62 436 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 OR14I1A6ND48 311 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 C5orf58C9J3I9 102 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 AQP7O14520 342 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 ADAM10O14672 748 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 FCMRO60667 390 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 TNFRSF21O75509 655 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 KRT34O76011 436 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 ZIC2O95409 532 aaPredicted RBP11.71□□□□□ -0.53
COL6A6-203ENST00000511332 CHRM4P08173 479 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 CELA3AP09093 270 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 UBL4AP11441 157 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 ABOP16442 354 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 GNLYP22749 145 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 PRDX6P30041 224 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 CASP6P55212 293 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 SUMO3P55854 103 aaPredicted RBP11.71□□□□□ -0.53
COL6A6-203ENST00000511332 DSCR4P56555 118 aaPredicted RBP11.71□□□□□ -0.53
COL6A6-203ENST00000511332 MTPNP58546 118 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 KLHL26Q53HC5 615 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 PDZK1Q5T2W1 519 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 AP1ARQ63HQ0 302 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 OR5M10Q6IEU7 315 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 TRILQ7L0X0 811 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 ARPINQ7Z6K5 226 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 SPPL2CQ8IUH8 684 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 METTL25Q8N6Q8 603 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 POU5F2Q8N7G0 328 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 ANKFN1Q8N957 763 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 CCDC197Q8NCU1 140 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 OR2M3Q8NG83 312 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 OR8J3Q8NGG0 315 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 OR14L1PQ8NHC6 308 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 PHOSPHO1Q8TCT1 267 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 DUSP19Q8WTR2 217 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 SLC38A5Q8WUX1 472 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 LRRC58Q96CX6 371 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 RCN3Q96D15 328 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 THUMPD3Q9BV44 507 aaKnown RBP11.71□□□□□ -0.53
COL6A6-203ENST00000511332 RTN4RQ9BZR6 473 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 OR2B2Q9GZK3 357 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 SLC38A1Q9H2H9 487 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 IKZF5Q9H5V7 419 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 SUCOQ9UBS9 1254 aaKnown RBP11.71□□□□□ -0.53
COL6A6-203ENST00000511332 FBXL2Q9UKC9 423 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 SLC35A3Q9Y2D2 325 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 MRPS18CQ9Y3D5 142 aaKnown RBP11.71□□□□□ -0.53
COL6A6-203ENST00000511332 LIPGQ9Y5X9 500 aa11.71□□□□□ -0.53
COL6A6-203ENST00000511332 HEATR5AQ86XA9 2040 aa11.7□□□□□ -0.54
COL6A6-203ENST00000511332 ARHGAP21Q5T5U3 1957 aa11.7□□□□□ -0.54
COL6A6-203ENST00000511332 DSPPQ9NZW4 1301 aa11.7□□□□□ -0.54
COL6A6-203ENST00000511332 A0A1B0GTH9 108 aa11.7□□□□□ -0.54
COL6A6-203ENST00000511332 A0A1B0GVC2 190 aa11.7□□□□□ -0.54
COL6A6-203ENST00000511332 PRAMEF27A3QJZ7 478 aa11.7□□□□□ -0.54
COL6A6-203ENST00000511332 SERINC4A6NH21 518 aa11.7□□□□□ -0.54
COL6A6-203ENST00000511332 FAM47E-STBD1D6RA91 191 aa11.7□□□□□ -0.54
COL6A6-203ENST00000511332 FXYD1O00168 92 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms