RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 hCG_1818297A0A087WSY0 165 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 A0A1W2PPM1 405 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 OR52A4PA6NMU1 304 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 E7EQ34 232 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 UBFD1O14562 309 aaKnown RBP4.83□□□□□ -1.64
GYPB-212ENST00000511198 BIRC5O15392 142 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 PDE9AO76083 593 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 KLHL2O95198 593 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 LSM8O95777 96 aaKnown RBP4.83□□□□□ -1.64
GYPB-212ENST00000511198 CALB1P05937 261 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 INHBAP08476 426 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 HBQ1P09105 142 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 KRT5P13647 590 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 ITGAXP20702 1163 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 PRDX6P30041 224 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 ACVR1BP36896 505 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 PIK3CAP42336 1068 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 RPL5P46777 297 aaKnown RBP4.83□□□□□ -1.64
GYPB-212ENST00000511198 ASCL1P50553 236 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 PRKAA2P54646 552 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 TAS2R40P59535 323 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 GPX6P59796 221 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 HPCAP84074 193 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 VLDLRP98155 873 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 GNA12Q03113 381 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 RAD51Q06609 339 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 TRAF2Q12933 501 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 PIGHQ14442 188 aaPredicted RBP4.83□□□□□ -1.64
GYPB-212ENST00000511198 FASTKD3Q14CZ7 662 aaKnown RBP4.83□□□□□ -1.64
GYPB-212ENST00000511198 RBBP7Q16576 425 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 TFDP3Q5H9I0 405 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 CFAP157Q5JU67 520 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 LGSNQ5TDP6 509 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 GARNL3Q5VVW2 1013 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 RAET1GQ6H3X3 334 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 RHBDD2Q6NTF9 364 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 DPPA4Q7L190 304 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 HSD11B1LQ7Z5J1 315 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 CRLF3Q8IUI8 442 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 PDIK1LQ8N165 341 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 NAT8LQ8N9F0 302 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 RBM15BQ8NDT2 890 aaKnown RBP4.83□□□□□ -1.64
GYPB-212ENST00000511198 OR14A16Q8NHC5 309 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 TRPC4APQ8TEL6 797 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 SLC44A1Q8WWI5 657 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 SEMA4DQ92854 862 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 DGCR14Q96DF8 476 aaKnown RBP4.83□□□□□ -1.64
GYPB-212ENST00000511198 KTI12Q96EK9 354 aaPredicted RBP4.83□□□□□ -1.64
GYPB-212ENST00000511198 PANX3Q96QZ0 392 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 CD180Q99467 661 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 NMUR2Q9GZQ4 415 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 FANCEQ9HB96 536 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 FBXO6Q9NRD1 293 aaPredicted RBP4.83□□□□□ -1.64
GYPB-212ENST00000511198 SOHLH2Q9NX45 425 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 ANKRD10Q9NXR5 420 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 C6orf203Q9P0P8 240 aaPredicted RBP4.83□□□□□ -1.64
GYPB-212ENST00000511198 SLC23A2Q9UGH3 650 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 SLC7A8Q9UHI5 535 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 DNPEPQ9ULA0 475 aa4.83□□□□□ -1.64
GYPB-212ENST00000511198 SYNJ2BP-COX16A0A087WUM0 186 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 C15orf38-AP3S2A0A0A6YYH1 394 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 HMX3A6NHT5 357 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 COPEO14579 308 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 DENRO43583 198 aaKnown RBP4.82□□□□□ -1.64
GYPB-212ENST00000511198 HCRTR1O43613 425 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 CDC40O60508 579 aaKnown RBP eCLIP4.82□□□□□ -1.64
GYPB-212ENST00000511198 SNNO75324 88 aaPredicted RBP4.82□□□□□ -1.64
GYPB-212ENST00000511198 TNFAIP8O95379 198 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 HLA-DRAP01903 254 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 ZCCHC18P0CG32 403 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 SMIM18P0DKX4 95 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 ZNF24P17028 368 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 BGNP21810 368 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 CNTFP26441 200 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 TEAD1P28347 426 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 CCR1P32246 355 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 RFC1P35251 1148 aaPredicted RBP4.82□□□□□ -1.64
GYPB-212ENST00000511198 CDKN2BP42772 138 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 MTNR1AP48039 350 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 SERPINB9P50453 376 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 KPNA2P52292 529 aaKnown RBP4.82□□□□□ -1.64
GYPB-212ENST00000511198 ZNF33BQ06732 778 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 MAMLD1Q13495 774 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 CYLC2Q14093 348 aaPredicted RBP4.82□□□□□ -1.64
GYPB-212ENST00000511198 KRT81Q14533 505 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 PDK3Q15120 406 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 TAF5Q15542 800 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 TAZQ16635 292 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 TEX44Q53QW1 395 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 ARMC3Q5W041 872 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 TXNRD3NBQ6F5E7 133 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 ZFP1Q6P2D0 407 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 BRAT1Q6PJG6 821 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 UGT2A3Q6UWM9 527 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 C3orf62Q6ZUJ4 267 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 SH2D5Q6ZV89 423 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 BBS12Q6ZW61 710 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 PLEKHM3Q6ZWE6 761 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 RAPH1Q70E73 1250 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 CREB3L2Q70SY1 520 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms