RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 RHBDD3Q9Y3P4 386 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 CEPT1Q9Y6K0 416 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 BAZ2BQ9UIF8 2168 aaKnown RBP3.66□□□□□ -1.82
NEDD4-209ENST00000508871 SMIM35A0A1B0GVV1 85 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 LRRC30A6NM36 301 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 NOTOA8MTQ0 251 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 PRSS44E7EML9 344 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 TRIM77I1YAP6 450 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 FGF10O15520 208 aaPredicted RBP3.66□□□□□ -1.82
NEDD4-209ENST00000508871 SAGP10523 405 aaPredicted RBP3.66□□□□□ -1.82
NEDD4-209ENST00000508871 MGMTP16455 207 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 KLK7P49862 253 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 ERFP50548 548 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 ANXA11P50995 505 aaKnown RBP3.66□□□□□ -1.82
NEDD4-209ENST00000508871 ARHGDIAP52565 204 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 GNG11P61952 73 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 SIRPAP78324 504 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 VLDLRP98155 873 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 BNIP2Q12982 314 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 GAB4Q2WGN9 574 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF750Q32MQ0 723 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 NDUFAF6Q330K2 333 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 TMEM35AQ53FP2 167 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 KLHL12Q53G59 568 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 LACTB2Q53H82 288 aaPredicted RBP3.66□□□□□ -1.82
NEDD4-209ENST00000508871 VWA2Q5GFL6 755 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 RTP2Q5QGT7 225 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 SLC39A4Q6P5W5 647 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 ASCL4Q6XD76 172 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF793Q6ZN11 406 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 SLC16A9Q7RTY1 509 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 FAM71AQ8IYT1 594 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 BCORP1Q8N888 145 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 TP53I13Q8NBR0 393 aaPredicted RBP3.66□□□□□ -1.82
NEDD4-209ENST00000508871 OR4K1Q8NGD4 311 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 HMGCLL1Q8TB92 370 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 OR1E3Q8WZA6 343 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 MISP3Q96FF7 219 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 RNF145Q96MT1 663 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 VSTM2LQ96N03 204 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 PCDHB18PQ96TA0 734 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 GPER1Q99527 375 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 FZD8Q9H461 694 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 ELOVL6Q9H5J4 265 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 FZD3Q9NPG1 666 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 XPNPEP1Q9NQW7 623 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 DTLQ9NZJ0 730 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 DNAJC12Q9UKB3 198 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 B3GALT5Q9Y2C3 310 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 ZBTB42B2RXF5 422 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 CLDN5O00501 218 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 RFXANKO14593 260 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 UBDO15205 165 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 B4GALT4O60513 344 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 CLIC3O95833 236 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 H1F0P07305 194 aaKnown RBP3.66□□□□□ -1.82
NEDD4-209ENST00000508871 HTR2CP28335 458 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 TIRAPP58753 221 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 HMGCS1Q01581 520 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 GRIK3Q13003 919 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 EIF2B1Q14232 305 aaKnown RBP3.66□□□□□ -1.82
NEDD4-209ENST00000508871 MOGQ16653 247 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF699Q32M78 642 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 ITPRIPL2Q3MIP1 535 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 TIGD5Q53EQ6 642 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 CCNJQ5T5M9 372 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 AGAP6Q5VW22 663 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF385CQ66K41 422 aaPredicted RBP3.66□□□□□ -1.82
NEDD4-209ENST00000508871 TMEM220Q6QAJ8 160 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 OAFQ86UD1 273 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 SLC5A8Q8N695 610 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 ACOT12Q8WYK0 555 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 APBB2Q92870 758 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 MOCOSQ96EN8 888 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 CHFRQ96EP1 664 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 OR14A2Q96R54 314 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 AGPAT1Q99943 283 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 MND1Q9BWT6 205 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 NMNAT2Q9BZQ4 307 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 VNN3Q9NY84 501 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 FAM53CQ9NYF3 392 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 SLC25A10Q9UBX3 287 aaPredicted RBP3.66□□□□□ -1.82
NEDD4-209ENST00000508871 AGO2Q9UKV8 859 aaKnown RBP3.66□□□□□ -1.82
NEDD4-209ENST00000508871 WASF3Q9UPY6 502 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 SAMHD1Q9Y3Z3 626 aaKnown RBP3.66□□□□□ -1.82
NEDD4-209ENST00000508871 LOXL2Q9Y4K0 774 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 FAM90A18PA6NE21 464 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 FAM90A16PA6NEW6 464 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 FAM90A9PA6NNJ1 464 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 FAM90A5PA8MXJ8 464 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 B5MCH6 92 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 RHODO00212 210 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 ADAM10O14672 748 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 SOX15O60248 233 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 PAGE4O60829 102 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 MT-ND4P03905 459 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 LGALS2P05162 132 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 H2AFZP0C0S5 128 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 FAM90A15PP0C7V4 464 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 FAM90A14PP0C7W9 464 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms