RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 PRAMEF27A3QJZ7 478 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 ZNF860A6NHJ4 632 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 FAM25AB3EWG3 89 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 FAM25CB3EWG5 89 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 FAM25GB3EWG6 89 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 POLR1CO15160 346 aaPredicted RBP10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 MAZP56270 477 aaKnown RBP10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 ACSM1Q08AH1 577 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 TRAM2Q15035 370 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 CDK10Q15131 360 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 SYPL1Q16563 259 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 BAK1Q16611 211 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 ZNF362Q5T0B9 420 aaPredicted RBP10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 LCN1P1Q5VSP4 162 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 MZT2AQ6P582 158 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 CD200R1LQ6Q8B3 271 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 QSOX2Q6ZRP7 698 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 RASSF6Q6ZTQ3 369 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 OLIG3Q7RTU3 272 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 IQCHQ86VS3 1027 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 UBALD2Q8IYN6 164 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 TMEFF1Q8IYR6 380 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 ABCA7Q8IZY2 2146 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 SLC7A5P1Q8MH63 180 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 ASCC1Q8N9N2 400 aaKnown RBP10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 OR4D11Q8NGI4 311 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 BAHD1Q8TBE0 780 aaPredicted RBP10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 ZFPM2Q8WW38 1151 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 C1GALT1C1Q96EU7 318 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 DEPDC7Q96QD5 511 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 YIPF4Q9BSR8 244 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 SLA2Q9H6Q3 261 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 ADAM30Q9UKF2 790 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 SLC13A4Q9UKG4 626 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 LIPT1Q9Y234 373 aa10.28□□□□□ -0.76
SH3RF1-203ENST00000508685 KDM4EB2RXH2 506 aaPredicted RBP10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 H0YGG7 62 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 YES1P07947 543 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 IGFBP1P08833 259 aaPredicted RBP10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 CD38P28907 300 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 ETV5P41161 510 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 STAT5AP42229 794 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 MLLT3P42568 568 aaPredicted RBP10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 MTNR1AP48039 350 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 ETV1P50549 477 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 BLKP51451 505 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 STARD6P59095 220 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 ARF3P61204 181 aaPredicted RBP10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 RPL6Q02878 288 aaKnown RBP10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 TGM3Q08188 693 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 FOXD4Q12950 439 aaPredicted RBP10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 TSPAN31Q12999 210 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 HNRNPA0Q13151 305 aaKnown RBP10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 LASP1Q14847 261 aaKnown RBP10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 LTB4RQ15722 352 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 ZNF628Q5EBL2 1059 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 ACSM5Q6NUN0 579 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 MZT2BQ6NZ67 158 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 ZNF730Q6ZMV8 503 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 RRM2BQ7LG56 351 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 RBM45Q8IUH3 476 aaKnown RBP10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 OR9A2Q8NGT5 310 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 LILRB4Q8NHJ6 448 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 GRPEL2Q8TAA5 225 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 OSTF1Q92882 214 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 TRIM63Q969Q1 353 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 RNFT2Q96EX2 444 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 ZC3HAV1LQ96H79 300 aaKnown RBP10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 FRMD6Q96NE9 622 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 ARHGAP9Q9BRR9 750 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 TRAF4Q9BUZ4 470 aaPredicted RBP10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 TPK1Q9H3S4 243 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 TIGARQ9NQ88 270 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 STARD5Q9NSY2 213 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 ZNF232Q9UNY5 417 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 ENTPD4Q9Y227 616 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 MRPS17Q9Y2R5 130 aaKnown RBP10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 PCDHGB7Q9Y5F8 929 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 ENTPD2Q9Y5L3 495 aa10.27□□□□□ -0.77
SH3RF1-203ENST00000508685 A0A0J9YY10 115 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 OR5K3A6NET4 321 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 OR5K4A6NMS3 321 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 METTL12A8MUP2 240 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 CYP7B1O75881 506 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 HLA-DQB1P01920 261 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 CSF2P04141 144 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 HLA-DPB1P04440 258 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 HMGN2P05204 90 aaKnown RBP10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 CTSBP07858 339 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 FHP07954 510 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 CSF3P09919 207 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 MSL3P1P0C860 447 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 CPN2P22792 545 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 TCEA1P23193 301 aaKnown RBP10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 CD27P26842 260 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 NUDT1P36639 197 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 MC3RP41968 323 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 NKX2-5P52952 324 aaPredicted RBP10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 GAS1P54826 345 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 PRR5P85299 388 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms