RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 A0A087WZY1 265 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 C7orf72A4D263 438 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 SHISA9B4DS77 424 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 SHISA8B8ZZ34 492 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 STX16-NPEPL1H3BU86 382 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 STX16O14662 325 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 CXCL13O43927 109 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 LMX1BO60663 402 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 COQ9O75208 318 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 SLITRK5O94991 958 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 ESRRBO95718 433 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 PDYNP01213 254 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 PABPC4LP0CB38 370 aaKnown RBP8.34□□□□□ -1.07
NEDD9-211ENST00000508546 H2AFXP16104 143 aaPredicted RBP8.34□□□□□ -1.07
NEDD9-211ENST00000508546 MPIP34949 423 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 PRR5P85299 388 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 NAB1Q13506 487 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 P2RY6Q15077 328 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 DECR1Q16698 335 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 TECRLQ5HYJ1 363 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 AGAP6Q5VW22 663 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 KLC3Q6P597 504 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 TFAP2EQ6VUC0 442 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 SSX8Q7RTT4 187 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 ATG4DQ86TL0 474 aaPredicted RBP8.34□□□□□ -1.07
NEDD9-211ENST00000508546 MEX3DQ86XN8 651 aaKnown RBP8.34□□□□□ -1.07
NEDD9-211ENST00000508546 FAM9CQ8IZT9 166 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 GTPBP8Q8N3Z3 284 aaPredicted RBP8.34□□□□□ -1.07
NEDD9-211ENST00000508546 C1orf52Q8N6N3 182 aaKnown RBP8.34□□□□□ -1.07
NEDD9-211ENST00000508546 PTGR2Q8N8N7 351 aaPredicted RBP8.34□□□□□ -1.07
NEDD9-211ENST00000508546 OR7G2Q8NG99 324 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 OR4F6Q8NGB9 312 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 OR2V1Q8NHB1 315 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 SELENOMQ8WWX9 145 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 KISS1RQ969F8 398 aaPredicted RBP8.34□□□□□ -1.07
NEDD9-211ENST00000508546 PARD6BQ9BYG5 372 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 TBL1XR1Q9BZK7 514 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 GP6Q9HCN6 339 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 SLC35C2Q9NQQ7 365 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 GIMAP4Q9NUV9 329 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 MCM8Q9UJA3 840 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 MRTO4Q9UKD2 239 aaKnown RBP8.34□□□□□ -1.07
NEDD9-211ENST00000508546 RAB21Q9UL25 225 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 TMCO1Q9UM00 188 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 VDAC3Q9Y277 283 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 ZNF281Q9Y2X9 895 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 SNX24Q9Y343 169 aa8.34□□□□□ -1.07
NEDD9-211ENST00000508546 KMT2CQ8NEZ4 4911 aaKnown RBP8.34□□□□□ -1.07
NEDD9-211ENST00000508546 A0A0J9YW62 118 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 GOLGA8QA0A0J9YX86 632 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 CCDC151A5D8V7 595 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 GOLGA8OA6NCC3 632 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 GOLGA8NF8WBI6 632 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 GOLGA8RI6L899 631 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 UBFD1O14562 309 aaKnown RBP8.33□□□□□ -1.08
NEDD9-211ENST00000508546 TNFSF11O14788 317 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 RAD51CO43502 376 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 RAMP1O60894 148 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 ERLIN1O75477 346 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 PSMG1O95456 288 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 ANGPTL1O95841 491 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 PGRP06401 933 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 IL3P08700 152 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 IGHV4-31P0DP07 118 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 HSD3B1P14060 373 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 PSMA4P25789 261 aaKnown RBP8.33□□□□□ -1.08
NEDD9-211ENST00000508546 HSD3B2P26439 372 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 PSMD4P55036 377 aaKnown RBP8.33□□□□□ -1.08
NEDD9-211ENST00000508546 VSNL1P62760 191 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 IRX1P78414 480 aaPredicted RBP8.33□□□□□ -1.08
NEDD9-211ENST00000508546 ZNF155Q12901 538 aaPredicted RBP8.33□□□□□ -1.08
NEDD9-211ENST00000508546 CSTF3Q12996 717 aaKnown RBP8.33□□□□□ -1.08
NEDD9-211ENST00000508546 ITGADQ13349 1161 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 RNPS1Q15287 305 aaKnown RBP8.33□□□□□ -1.08
NEDD9-211ENST00000508546 TSC22D1Q15714 1073 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 SGO1Q5FBB7 561 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 TMEM201Q5SNT2 666 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 SH2D4BQ5SQS7 431 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 PDSS1Q5T2R2 415 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 HBMQ6B0K9 141 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 C11orf71Q6IPW1 123 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 WDR93Q6P2C0 686 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 APOOLQ6UXV4 268 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 CCDC25Q86WR0 208 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 TDRPQ86YL5 185 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 ZNF619Q8N2I2 560 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 RNF128Q8TEB7 428 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 PROX1Q92786 737 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 EXOSC8Q96B26 276 aaKnown RBP8.33□□□□□ -1.08
NEDD9-211ENST00000508546 ZBTB8AQ96BR9 441 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 PHF21BQ96EK2 531 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 RADILQ96JH8 1075 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 NSUN5Q96P11 429 aaKnown RBP8.33□□□□□ -1.08
NEDD9-211ENST00000508546 CACNG6Q9BXT2 260 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 Q9N2J8 555 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 SENP1Q9P0U3 644 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 KLHL13Q9P2N7 655 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 VPS29Q9UBQ0 182 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 SNX6Q9UNH7 406 aa8.33□□□□□ -1.08
NEDD9-211ENST00000508546 C19orf53Q9UNZ5 99 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms