RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 HSDL2Q6YN16 418 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 USP53Q70EK8 1073 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 ABHD13Q7L211 337 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 ZNF614Q8N883 585 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 AVL9Q8NBF6 648 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 CAMKVQ8NCB2 501 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 PFN4Q8NHR9 129 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 CEP19Q96LK0 163 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 C20orf141Q9NUB4 165 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 TOR4AQ9NXH8 423 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 TESQ9UGI8 421 aaKnown RBP13.49□□□□□ -0.25
DDX41-208ENST00000507955 PHF11Q9UIL8 331 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 CACNA1IQ9P0X4 2223 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 UBXN7O94888 489 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 CLEC2LP0C7M8 214 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 HTR3AP46098 478 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 ARFIP1P53367 373 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 DEFA1P59665 94 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 DEFA3P59666 94 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 TSPAN31Q12999 210 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 FZD2Q14332 565 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 SMARCD3Q6STE5 483 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 PHC2Q8IXK0 858 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 METTL27Q8N6F8 245 aaPredicted RBP13.48□□□□□ -0.25
DDX41-208ENST00000507955 CSNK1A1LQ8N752 337 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 ANKK1Q8NFD2 765 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 OR4N2Q8NGD1 307 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 OR6F1Q8NGZ6 308 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 GPBAR1Q8TDU6 330 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 TM9SF2Q99805 663 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 MND1Q9BWT6 205 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 DPH1Q9BZG8 443 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 RACGAP1Q9H0H5 632 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 MTHFD2LQ9H903 347 aaPredicted RBP13.48□□□□□ -0.25
DDX41-208ENST00000507955 KLHL28Q9NXS3 571 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 MMP17Q9ULZ9 603 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 SPIN1Q9Y657 262 aaPredicted RBP13.48□□□□□ -0.25
DDX41-208ENST00000507955 WDFY4Q6ZS81 3184 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 DUXAA6NLW8 204 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 C2orf74A8MZ97 194 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 SYT5O00445 386 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 ENDOUP21128 410 aaKnown RBP13.48□□□□□ -0.25
DDX41-208ENST00000507955 MAOBP27338 520 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 PRKAR1BP31321 381 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 OR2B6P58173 313 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 CSTF1Q05048 431 aaKnown RBP13.48□□□□□ -0.25
DDX41-208ENST00000507955 INSL4Q14641 139 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 EOGTQ5NDL2 527 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 DCST2Q5T1A1 773 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 SLC35F1Q5T1Q4 408 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 MRPL2Q5T653 305 aaKnown RBP13.48□□□□□ -0.25
DDX41-208ENST00000507955 FHL5Q5TD97 284 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 RSBN1Q5VWQ0 802 aaPredicted RBP13.48□□□□□ -0.25
DDX41-208ENST00000507955 PEX5LQ8IYB4 626 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 SYT14Q8NB59 555 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 OR9Q1Q8NGQ5 310 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 TMEM163Q8TC26 289 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 GNPDA2Q8TDQ7 276 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 NACC2Q96BF6 587 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 RNF31Q96EP0 1072 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 SAMD8Q96LT4 415 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 CCDC32Q9BV29 185 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 MED20Q9H944 212 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 TRAPPC4Q9Y296 219 aa13.48□□□□□ -0.25
DDX41-208ENST00000507955 LINC00854A0A1B0GVQ3 168 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 A8MV72 311 aaPredicted RBP13.47□□□□□ -0.25
DDX41-208ENST00000507955 LALBAP00709 142 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 CTSEP14091 401 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 GABRA3P34903 492 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 MAZP56270 477 aaKnown RBP13.47□□□□□ -0.25
DDX41-208ENST00000507955 UBE2IP63279 158 aaKnown RBP13.47□□□□□ -0.25
DDX41-208ENST00000507955 MAT1AQ00266 395 aaKnown RBP13.47□□□□□ -0.25
DDX41-208ENST00000507955 HHEXQ03014 270 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 PLAURQ03405 335 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 GPR50Q13585 617 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 NNATQ16517 81 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 ARHGAP11BQ3KRB8 267 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 ATAD3CQ5T2N8 411 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 MEDAGQ5VYS4 303 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 FCRLBQ6BAA4 426 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 C22orf42Q6IC83 251 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 UBQLNLQ8IYU4 475 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 COX18Q8N8Q8 333 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 PIGXQ8TBF5 258 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 SLX1AQ9BQ83 275 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 CCDC3Q9BQI4 270 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 LRP4O75096 1905 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 RAB36O95755 333 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 IGFBP4P22692 258 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 PSMA1P25786 263 aaKnown RBP13.47□□□□□ -0.25
DDX41-208ENST00000507955 PPM1FP49593 454 aaPredicted RBP13.47□□□□□ -0.25
DDX41-208ENST00000507955 CAV3P56539 151 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 YPEL5P62699 121 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 EEF1A1P68104 462 aaKnown RBP13.47□□□□□ -0.25
DDX41-208ENST00000507955 C6orf183Q5T699 404 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 ABI3BPQ7Z7G0 1075 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 CA13Q8N1Q1 262 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 PROKR2Q8NFJ6 384 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 ACOT11Q8WXI4 607 aaPredicted RBP13.47□□□□□ -0.25
DDX41-208ENST00000507955 DCLRE1CQ96SD1 692 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms