RNA–Protein interactions for RNA: ENST00000506747.5

CLOCK-205, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 1,337 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-205ENST00000506747 NOL3O60936 208 aaKnown RBP3.01□□□□□ -1.93
CLOCK-205ENST00000506747 TRIM3O75382 744 aaPredicted RBP3.01□□□□□ -1.93
CLOCK-205ENST00000506747 PTMAP06454 111 aaKnown RBP3.01□□□□□ -1.93
CLOCK-205ENST00000506747 PPIAL4GP0DN37 164 aa3.01□□□□□ -1.93
CLOCK-205ENST00000506747 PDHBP11177 359 aa3.01□□□□□ -1.93
CLOCK-205ENST00000506747 TBXA2RP21731 343 aa3.01□□□□□ -1.93
CLOCK-205ENST00000506747 SOX6P35712 828 aa3.01□□□□□ -1.93
CLOCK-205ENST00000506747 BDKRB1P46663 353 aa3.01□□□□□ -1.93
CLOCK-205ENST00000506747 RPL34P49207 117 aaKnown RBP3.01□□□□□ -1.93
CLOCK-205ENST00000506747 STARP49675 285 aa3.01□□□□□ -1.93
CLOCK-205ENST00000506747 IST1P53990 364 aa3.01□□□□□ -1.93
CLOCK-205ENST00000506747 NAPAP54920 295 aa3.01□□□□□ -1.93
CLOCK-205ENST00000506747 RND3P61587 244 aa3.01□□□□□ -1.93
CLOCK-205ENST00000506747 CRMP1Q14194 572 aa3.01□□□□□ -1.93
CLOCK-205ENST00000506747 ATXN7L3Q14CW9 347 aaPredicted RBP3.01□□□□□ -1.93
CLOCK-205ENST00000506747 CHI3L2Q15782 390 aa3.01□□□□□ -1.93
CLOCK-205ENST00000506747 TIMM50Q3ZCQ8 353 aa3.01□□□□□ -1.93
CLOCK-205ENST00000506747 SLC22A6Q4U2R8 563 aa3.01□□□□□ -1.93
CLOCK-205ENST00000506747 PAN3Q58A45 887 aaKnown RBP3.01□□□□□ -1.93
CLOCK-205ENST00000506747 RABGAP1LQ5R372 815 aa3.01□□□□□ -1.93
CLOCK-205ENST00000506747 HPS6Q86YV9 775 aa3.01□□□□□ -1.93
CLOCK-205ENST00000506747 ZDHHC21Q8IVQ6 265 aa3.01□□□□□ -1.93
CLOCK-205ENST00000506747 GPR65Q8IYL9 337 aa3.01□□□□□ -1.93
CLOCK-205ENST00000506747 LINC00612Q8N6U2 182 aa3.01□□□□□ -1.93
CLOCK-205ENST00000506747 IPMKQ8NFU5 416 aa3.01□□□□□ -1.93
CLOCK-205ENST00000506747 VN1R17PQ8TDU5 208 aa3.01□□□□□ -1.93
CLOCK-205ENST00000506747 TFB1MQ8WVM0 346 aaKnown RBP3.01□□□□□ -1.93
CLOCK-205ENST00000506747 TMEM80Q96HE8 168 aa3.01□□□□□ -1.93
CLOCK-205ENST00000506747 VSIG2Q96IQ7 327 aa3.01□□□□□ -1.93
CLOCK-205ENST00000506747 DHX33Q9H6R0 707 aaKnown RBP3.01□□□□□ -1.93
CLOCK-205ENST00000506747 TIGARQ9NQ88 270 aa3.01□□□□□ -1.93
CLOCK-205ENST00000506747 WRAP73Q9P2S5 460 aaPredicted RBP3.01□□□□□ -1.93
CLOCK-205ENST00000506747 NAALAD2Q9Y3Q0 740 aa3.01□□□□□ -1.93
CLOCK-205ENST00000506747 KDRP35968 1356 aa3.01□□□□□ -1.93
CLOCK-205ENST00000506747 SAGE2PA6NJ88 616 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 PPIAL4DF5H284 164 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 ZSCAN12O43309 604 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 TBX19O60806 448 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 SPAG6O75602 509 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 RHBDL1O75783 438 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 MFN2O95140 757 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 DUSP14O95147 198 aaKnown RBP3□□□□□ -1.93
CLOCK-205ENST00000506747 THY1P04216 161 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 H2AFZP0C0S5 128 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 TSPY4P0CV99 314 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 TSPY10P0CW01 314 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 CLUP10909 449 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 H2AFXP16104 143 aaPredicted RBP3□□□□□ -1.93
CLOCK-205ENST00000506747 DLSTP36957 453 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 MEOX2P50222 304 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 NOVA1P51513 510 aaKnown RBP3□□□□□ -1.93
CLOCK-205ENST00000506747 SNTB2Q13425 540 aaKnown RBP3□□□□□ -1.93
CLOCK-205ENST00000506747 CNPY1Q3B7I2 92 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 NADK2Q4G0N4 442 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 HSP90AA5PQ58FG0 334 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 SLC25A30Q5SVS4 291 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 ATAD3CQ5T2N8 411 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 IFNEQ86WN2 208 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 CSNK1A1LQ8N752 337 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 OR2T3Q8NH03 318 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 FAM3CQ92520 227 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 PAXXQ9BUH6 204 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 POLD4Q9HCU8 107 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3□□□□□ -1.93
CLOCK-205ENST00000506747 MRPL39Q9NYK5 338 aaKnown RBP3□□□□□ -1.93
CLOCK-205ENST00000506747 SLC2A6Q9UGQ3 507 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 CHMP2BQ9UQN3 213 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 SPACA6W5XKT8 324 aa3□□□□□ -1.93
CLOCK-205ENST00000506747 FAM74A7A6NL05 159 aa2.99□□□□□ -1.93
CLOCK-205ENST00000506747 XPO1O14980 1071 aaKnown RBP2.99□□□□□ -1.93
CLOCK-205ENST00000506747 STX7O15400 261 aaKnown RBP2.99□□□□□ -1.93
CLOCK-205ENST00000506747 STX11O75558 287 aa2.99□□□□□ -1.93
CLOCK-205ENST00000506747 SCRG1O75711 98 aa2.99□□□□□ -1.93
CLOCK-205ENST00000506747 PCCBP05166 539 aa2.99□□□□□ -1.93
CLOCK-205ENST00000506747 CD55P08174 381 aa2.99□□□□□ -1.93
CLOCK-205ENST00000506747 SLC35E2P0CK97 266 aa2.99□□□□□ -1.93
CLOCK-205ENST00000506747 PGAM2P15259 253 aa2.99□□□□□ -1.93
CLOCK-205ENST00000506747 OTX2P32243 289 aa2.99□□□□□ -1.93
CLOCK-205ENST00000506747 KIF5BP33176 963 aa2.99□□□□□ -1.93
CLOCK-205ENST00000506747 ACVR1BP36896 505 aa2.99□□□□□ -1.93
CLOCK-205ENST00000506747 MDH2P40926 338 aaKnown RBP2.99□□□□□ -1.93
CLOCK-205ENST00000506747 XCR1P46094 333 aa2.99□□□□□ -1.93
CLOCK-205ENST00000506747 CSTF1Q05048 431 aaKnown RBP2.99□□□□□ -1.93
CLOCK-205ENST00000506747 PUDPQ08623 228 aa2.99□□□□□ -1.93
CLOCK-205ENST00000506747 SELPLGQ14242 412 aa2.99□□□□□ -1.93
CLOCK-205ENST00000506747 KCNJ11Q14654 390 aa2.99□□□□□ -1.93
CLOCK-205ENST00000506747 PRR4Q16378 134 aa2.99□□□□□ -1.93
CLOCK-205ENST00000506747 SLC36A3Q495N2 470 aa2.99□□□□□ -1.93
CLOCK-205ENST00000506747 FAM74A3Q4VXF1 159 aa2.99□□□□□ -1.93
CLOCK-205ENST00000506747 SBK1Q52WX2 424 aa2.99□□□□□ -1.93
CLOCK-205ENST00000506747 SLX4IPQ5VYV7 408 aa2.99□□□□□ -1.93
CLOCK-205ENST00000506747 SLC22A10Q63ZE4 541 aa2.99□□□□□ -1.93
CLOCK-205ENST00000506747 C17orf82Q86X59 251 aaPredicted RBP2.99□□□□□ -1.93
CLOCK-205ENST00000506747 SPRYD4Q8WW59 207 aaPredicted RBP2.99□□□□□ -1.93
CLOCK-205ENST00000506747 SIGLEC12Q96PQ1 595 aa2.99□□□□□ -1.93
CLOCK-205ENST00000506747 TPPP3Q9BW30 176 aa2.99□□□□□ -1.93
CLOCK-205ENST00000506747 RMND5AQ9H871 391 aa2.99□□□□□ -1.93
CLOCK-205ENST00000506747 CUTCQ9NTM9 273 aa2.99□□□□□ -1.93
CLOCK-205ENST00000506747 SAMD4AQ9UPU9 718 aaKnown RBP2.99□□□□□ -1.93
CLOCK-205ENST00000506747 KIF3AQ9Y496 699 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms