RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 SPNS3Q6ZMD2 512 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 Q6ZSR9 355 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 ZNF551Q7Z340 670 aaPredicted RBP9.44□□□□□ -0.9
NR1I3-222ENST00000506018 LRRC34Q8IZ02 419 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 FADS6Q8N9I5 356 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 C9orf106Q8NAJ2 232 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 NUP43Q8NFH3 380 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 OR2M3Q8NG83 312 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 RNF138Q8WVD3 245 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 SLC9A6Q92581 669 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 INTS12Q96CB8 462 aaKnown RBP9.44□□□□□ -0.9
NR1I3-222ENST00000506018 EGLN2Q96KS0 407 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 FCRL1Q96LA6 429 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 RBM24Q9BX46 236 aaKnown RBP9.44□□□□□ -0.9
NR1I3-222ENST00000506018 TNFRSF12AQ9NP84 129 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 SLCO1B3Q9NPD5 702 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 FGFR1OP2Q9NVK5 253 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 PACSIN3Q9UKS6 424 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 SLC22A20A6NK97 555 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 A6NNC1 897 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 KDM4EB2RXH2 506 aaPredicted RBP9.43□□□□□ -0.9
NR1I3-222ENST00000506018 CASKO14936 926 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 PIP5K1BO14986 540 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 ZIC3O60481 467 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 LYPLA1O75608 230 aaPredicted RBP9.43□□□□□ -0.9
NR1I3-222ENST00000506018 UTS2O95399 124 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 CHRNGP07510 517 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 KRT16P08779 473 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 ALOX5P09917 674 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 KITP10721 976 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 EPXP11678 715 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 AGFG1P52594 562 aaKnown RBP9.43□□□□□ -0.9
NR1I3-222ENST00000506018 ART1P52961 327 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 CLDN18P56856 261 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 MAD2L1Q13257 205 aaPredicted RBP9.43□□□□□ -0.9
NR1I3-222ENST00000506018 FGFBP1Q14512 234 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 PRSS53Q2L4Q9 553 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 RFTN2Q52LD8 501 aaPredicted RBP9.43□□□□□ -0.9
NR1I3-222ENST00000506018 GKAP1Q5VSY0 366 aaPredicted RBP9.43□□□□□ -0.9
NR1I3-222ENST00000506018 ANKRD26P1Q6NSI1 321 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 ADGRE4PQ86SQ3 457 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 MISPQ8IVT2 679 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 UBQLNLQ8IYU4 475 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 ZNF781Q8N8C0 355 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 COX18Q8N8Q8 333 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 ANKS4BQ8N8V4 417 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 OR2T11Q8NH01 316 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 CLHC1Q8NHS4 586 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 DUSP19Q8WTR2 217 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 JADE3Q92613 823 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 CIDECQ96AQ7 238 aaPredicted RBP9.43□□□□□ -0.9
NR1I3-222ENST00000506018 SORT1Q99523 831 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 GPATCH1Q9BRR8 931 aaKnown RBP9.43□□□□□ -0.9
NR1I3-222ENST00000506018 YIPF4Q9BSR8 244 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 G6PC3Q9BUM1 346 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 FAM107BQ9H098 131 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 RASSF1Q9NS23 344 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 MRGBPQ9NV56 204 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 JKAMPQ9P055 326 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 MED11Q9P086 117 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 KLHL14Q9P2G3 628 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 CLCF1Q9UBD9 225 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 NDRG3Q9UGV2 375 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 ZDHHC2Q9UIJ5 367 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 PTGDR2Q9Y5Y4 395 aa9.43□□□□□ -0.9
NR1I3-222ENST00000506018 AKAP6Q13023 2319 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 NDUFAB1O14561 156 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 SCAMP2O15127 329 aaKnown RBP9.42□□□□□ -0.9
NR1I3-222ENST00000506018 HCRTR2O43614 444 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 NDUFB5O43674 189 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 NKX2-2O95096 273 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 ANGPTL1O95841 491 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 FCGR2AP12318 317 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 BCKDHAP12694 445 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 DNASE1P24855 282 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 DNAJA1P31689 397 aaKnown RBP9.42□□□□□ -0.9
NR1I3-222ENST00000506018 FRKP42685 505 aaPredicted RBP9.42□□□□□ -0.9
NR1I3-222ENST00000506018 SEC24CP53992 1094 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 SNTB1Q13884 538 aaKnown RBP9.42□□□□□ -0.9
NR1I3-222ENST00000506018 PDE7AQ13946 482 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 DAZAP2Q15038 168 aaPredicted RBP9.42□□□□□ -0.9
NR1I3-222ENST00000506018 MLC1Q15049 377 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 SGCBQ16585 318 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 GRAMD1BQ3KR37 738 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 LSM12Q3MHD2 195 aaKnown RBP9.42□□□□□ -0.9
NR1I3-222ENST00000506018 CPTPQ5TA50 214 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 BHLHB9Q6PI77 547 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 POMZP3Q6PJE2 187 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 SPATA21Q7Z572 469 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 LUZP2Q86TE4 346 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 MARCH3Q86UD3 253 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 GCNT2Q8N0V5 402 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 FNDC5Q8NAU1 212 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 CHDHQ8NE62 594 aaPredicted RBP9.42□□□□□ -0.9
NR1I3-222ENST00000506018 AGR3Q8TD06 166 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 BCAS4Q8TDM0 211 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 STON2Q8WXE9 905 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 PIK3R3Q92569 461 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 C1GALT1C1Q96EU7 318 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 CCT8L2Q96SF2 557 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms