RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 ZMIZ1Q9ULJ6 1067 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 MAFFQ9ULX9 164 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 SYT5O00445 386 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 AIFM1O95831 613 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 CD3GP09693 182 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 ANKRD34CP0C6C1 535 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 ADRB3P13945 408 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 GCGRP47871 477 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 AP2S1P53680 142 aaPredicted RBP11.08□□□□□ -0.64
UBE3D-206ENST00000505226 TGM3Q08188 693 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 MLF2Q15773 248 aaPredicted RBP11.08□□□□□ -0.64
UBE3D-206ENST00000505226 DECR1Q16698 335 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 C9orf64Q5T6V5 341 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 ZNF697Q5TEC3 545 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 METRNLQ641Q3 311 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 MTFR2Q6P444 385 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 SFXN4Q6P4A7 337 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 ARL9Q6T311 187 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 TMEM64Q6YI46 380 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 ZNF782Q6ZMW2 699 aaPredicted RBP11.08□□□□□ -0.64
UBE3D-206ENST00000505226 OR8H3Q8N146 312 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 ZNF687Q8N1G0 1237 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 BEST4Q8NFU0 473 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 OR4D9Q8NGE8 314 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 OR13C5Q8NGS8 318 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 ACOT12Q8WYK0 555 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 SLC41A3Q96GZ6 507 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 CAMK1GQ96NX5 476 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 JAM3Q9BX67 310 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 ERVMER34-1Q9H9K5 563 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 GLTPQ9NZD2 209 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 MOSPD1Q9UJG1 213 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 ADAM30Q9UKF2 790 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 ABT1Q9ULW3 272 aaKnown RBP11.08□□□□□ -0.64
UBE3D-206ENST00000505226 MDC1Q14676 2089 aaKnown RBP11.08□□□□□ -0.64
UBE3D-206ENST00000505226 VCANP13611 3396 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 LINC00862A6NCI5 91 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 SLC9B1P1A6NJY1 282 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 IL9P15248 144 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 NPR2P20594 1047 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 SSTR2P30874 369 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 NTSP30990 170 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 CCR6P51684 374 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 ARHGAP19Q14CB8 494 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 WDR88Q6ZMY6 472 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 MBOAT2Q6ZWT7 520 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 DGLUCYQ7Z3D6 616 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 ACOT4Q8N9L9 421 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 OR2T33Q8NG76 320 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 OR2A1Q8NGT9 310 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 OR5W2Q8NH69 310 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 GIMAP5Q96F15 307 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 SLC35A4Q96G79 324 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 COX14Q96I36 57 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 MCHR1Q99705 422 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.08□□□□□ -0.64
UBE3D-206ENST00000505226 C20orf141Q9NUB4 165 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 EVA1BQ9NVM1 165 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 SLC7A7Q9UM01 511 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 AUP1Q9Y679 476 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 SCN3AQ9NY46 2000 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 ERI3O43414 337 aaKnown RBP11.07□□□□□ -0.64
UBE3D-206ENST00000505226 HYAL3O43820 417 aaPredicted RBP11.07□□□□□ -0.64
UBE3D-206ENST00000505226 VEGFDO43915 354 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 FGF18O76093 207 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 MPC2O95563 127 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 TCRBP04435 133 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 GALP22466 123 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 GIFP27352 417 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 CLCNKAP51800 687 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 GNA13Q14344 377 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 POU4F3Q15319 338 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 LGALSLQ3ZCW2 172 aaPredicted RBP11.07□□□□□ -0.64
UBE3D-206ENST00000505226 BICRALQ6AI39 1079 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 NIPAL3Q6P499 406 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 ESPNLQ6ZVH7 1005 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 PLEKHM3Q6ZWE6 761 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 ZNF765Q7L2R6 523 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 ACBD7Q8N6N7 88 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 NUP43Q8NFH3 380 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 PTP4A1Q93096 173 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 MS4A6EQ96DS6 147 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 AHCYL2Q96HN2 611 aaKnown RBP11.07□□□□□ -0.64
UBE3D-206ENST00000505226 SMAD5Q99717 465 aaKnown RBP11.07□□□□□ -0.64
UBE3D-206ENST00000505226 ZNF624Q9P2J8 865 aaPredicted RBP11.07□□□□□ -0.64
UBE3D-206ENST00000505226 ENTPD4Q9Y227 616 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 FZD7O75084 574 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 CLEC3AO75596 197 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 CXCL14O95715 111 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 RAF1P04049 648 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 CLUP10909 449 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 PRG2P13727 222 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 LAG3P18627 525 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 NDUFV2P19404 249 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 CERS1P27544 350 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 TRA2BP62995 288 aaKnown RBP11.07□□□□□ -0.64
UBE3D-206ENST00000505226 DGCR2P98153 550 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 SLC3A1Q07837 685 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 SLC9A5Q14940 896 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms