RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 REXO5Q96IC2 774 aaKnown RBP4.51□□□□□ -1.69
LMNB1-208ENST00000504788 COL21A1Q96P44 957 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 CADM1Q9BY67 442 aaKnown RBP4.51□□□□□ -1.69
LMNB1-208ENST00000504788 SLC25A18Q9H1K4 315 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 ALG2Q9H553 416 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 SPAG4Q9NPE6 437 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 POLE3Q9NRF9 147 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 ICAM5Q9UMF0 924 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 ABCG2Q9UNQ0 655 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 LIPT1Q9Y234 373 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 B3GNT3Q9Y2A9 372 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 L3MBTL1Q9Y468 752 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 ZNF451Q9Y4E5 1061 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 SVILO95425 2214 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 ADGRG4Q8IZF6 3080 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 COL12A1Q99715 3063 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 ZNF462Q96JM2 2506 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 HIVEP3Q5T1R4 2406 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 C15orf38-AP3S2A0A0A6YYH1 394 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 CDHR4A6H8M9 788 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 FAM220BPB1ANY3 271 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 GSC2O15499 205 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 UTS2O95399 124 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 ANP32DO95626 131 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 NTN1O95631 604 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 AGR2O95994 175 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 SEMG1P04279 462 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 KRT16P08779 473 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 ESRRAP11474 423 aaPredicted RBP4.51□□□□□ -1.69
LMNB1-208ENST00000504788 NID1P14543 1247 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 ETS2P15036 469 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 GGT1P19440 569 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 CD247P20963 164 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 ENDOUP21128 410 aaKnown RBP4.51□□□□□ -1.69
LMNB1-208ENST00000504788 HTR1EP28566 365 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 EVI2BP34910 448 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 PCGF2P35227 344 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 MSX2P35548 267 aaPredicted RBP4.51□□□□□ -1.69
LMNB1-208ENST00000504788 CHI3L1P36222 383 aaPredicted RBP4.51□□□□□ -1.69
LMNB1-208ENST00000504788 DCTP40126 519 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 ACAA2P42765 397 aaKnown RBP4.51□□□□□ -1.69
LMNB1-208ENST00000504788 CRATP43155 626 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 DNASE1L1P49184 302 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 ZNF136P52737 540 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 EEFSECP57772 596 aaKnown RBP4.51□□□□□ -1.69
LMNB1-208ENST00000504788 CDK6Q00534 326 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 LIPEQ05469 1076 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 GABPB1Q06547 395 aaPredicted RBP4.51□□□□□ -1.69
LMNB1-208ENST00000504788 SKP2Q13309 424 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 DECR1Q16698 335 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 MMEL1Q495T6 779 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 SPDYE7PQ495Y7 208 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 SOWAHCQ53LP3 525 aaPredicted RBP4.51□□□□□ -1.69
LMNB1-208ENST00000504788 C6orf163Q5TEZ5 329 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 SLC22A10Q63ZE4 541 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 SLC25A25Q6KCM7 469 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 RTL4Q6ZR62 310 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 ASB18Q6ZVZ8 466 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 SZRD1Q7Z422 152 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 GALNTL5Q7Z4T8 443 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 ARPINQ7Z6K5 226 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 HMGN2P46Q86SG4 172 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 GRAMD2AQ8IUY3 354 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 DEFB107AQ8IZN7 70 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 ZNF619Q8N2I2 560 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 CLIP4Q8N3C7 705 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 RNF148Q8N7C7 305 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 OR2M7Q8NG81 312 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 C9orf43Q8TAL5 461 aaPredicted RBP4.51□□□□□ -1.69
LMNB1-208ENST00000504788 PHF10Q8WUB8 498 aaKnown RBP4.51□□□□□ -1.69
LMNB1-208ENST00000504788 ASB15Q8WXK1 588 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 JADE3Q92613 823 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 PMM1Q92871 262 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 PNPLA2Q96AD5 504 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 ARSGQ96EG1 525 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 TMEM41AQ96HV5 264 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 CLPTM1LQ96KA5 538 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 UTP23Q9BRU9 249 aaKnown RBP4.51□□□□□ -1.69
LMNB1-208ENST00000504788 SPATA9Q9BWV2 254 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 LRMDAQ9H2I8 198 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 ZNF703Q9H7S9 590 aaPredicted RBP4.51□□□□□ -1.69
LMNB1-208ENST00000504788 ZDHHC11Q9H8X9 412 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 ZNF71Q9NQZ8 489 aaPredicted RBP4.51□□□□□ -1.69
LMNB1-208ENST00000504788 UBQLN4Q9NRR5 601 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 GID8Q9NWU2 228 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 TUBA8Q9NY65 449 aaPredicted RBP4.51□□□□□ -1.69
LMNB1-208ENST00000504788 CNIH4Q9P003 139 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 SUCOQ9UBS9 1254 aaKnown RBP4.51□□□□□ -1.69
LMNB1-208ENST00000504788 TEKT2Q9UIF3 430 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 FBXL2Q9UKC9 423 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 FAF1Q9UNN5 650 aaPredicted RBP4.51□□□□□ -1.69
LMNB1-208ENST00000504788 WDR45Q9Y484 360 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 WIF1Q9Y5W5 379 aa4.51□□□□□ -1.69
LMNB1-208ENST00000504788 A0A0G2JPF8 293 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 TCRBV5S2A0A599 114 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 HNRNPCL2B2RXH8 293 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 HNRNPCL3B7ZW38 293 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 EFNA2O43921 213 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 ZIC3O60481 467 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 HNRNPCL1O60812 293 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms