RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 MAPK11Q15759 364 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 ZNF141Q15928 474 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 SYPL1Q16563 259 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 FLYWCH1Q4VC44 716 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 GPAT3Q53EU6 434 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 KLHL26Q53HC5 615 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 TIGD3Q6B0B8 471 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 TYW3Q6IPR3 259 aaKnown RBP10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 APOOLQ6UXV4 268 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 HACD2Q6Y1H2 254 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 PRICKLE2Q7Z3G6 844 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 MARCH3Q86UD3 253 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 SLC22A16Q86VW1 577 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 SIAH3Q8IW03 269 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 ZNF619Q8N2I2 560 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 TMEM251Q8N6I4 163 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 METTL25Q8N6Q8 603 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 ANKFN1Q8N957 763 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 WDSUB1Q8N9V3 476 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 ZNF527Q8NB42 609 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 OR8J3Q8NGG0 315 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 OR1J4Q8NGS1 313 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 SLC38A5Q8WUX1 472 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 SLX1AQ9BQ83 275 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 THUMPD3Q9BV44 507 aaKnown RBP10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 SLC38A1Q9H2H9 487 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 A4GALTQ9NPC4 353 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 OLAHQ9NV23 265 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 QPCTLQ9NXS2 382 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 CALML5Q9NZT1 146 aa10.87□□□□□ -0.67
PDLIM5-208ENST00000504489 DIDO1Q9BTC0 2240 aaKnown RBP10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 PCNX1Q96RV3 2341 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 ZNF462Q96JM2 2506 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 IGLV3-32A0A0A0MS00 114 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 TMEM247A6NEH6 219 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 SCDO00767 359 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 GNB5O14775 395 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 AIM2O14862 343 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 TFECO14948 347 aaPredicted RBP10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 SCO2O43819 266 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 SLC28A2O43868 658 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 KIAA0513O60268 411 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 H6PDO95479 791 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 ANGPTL1O95841 491 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 CHRM4P08173 479 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 ARAFP10398 606 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 HPGDP15428 266 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 ENDOUP21128 410 aaKnown RBP10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 MST1P26927 711 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 RFC3P40938 356 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 TDGF1P3P51864 188 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 HPCAP84074 193 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 TLE1Q04724 770 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 CHRNEQ04844 493 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 C17orf67Q0P5P2 114 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 SELPLGQ14242 412 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 KRT72Q14CN4 511 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 GPR68Q15743 365 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 KRTCAP3Q53RY4 240 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 GCNT6Q5T4J0 391 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 PRAMEF8Q5VWM4 474 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 PRAMEF7Q5VXH5 474 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 FRRS1Q6ZNA5 592 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 OLIG3Q7RTU3 272 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 PLCZ1Q86YW0 608 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 MISPQ8IVT2 679 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 C10orf111Q8N326 155 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 FAM109AQ8N4B1 249 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 FITM2Q8N6M3 262 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 JSRP1Q96MG2 331 aaPredicted RBP10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 GNRHR2Q96P88 292 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 SLC39A3Q9BRY0 314 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 RTN4RQ9BZR6 473 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 TMEM38AQ9H6F2 299 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 KAT8Q9H7Z6 458 aaKnown RBP10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 ZDHHC11Q9H8X9 412 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 MTHFD2LQ9H903 347 aaPredicted RBP10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 BCL2L10Q9HD36 194 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 SUCOQ9UBS9 1254 aaKnown RBP10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 B4GALT7Q9UBV7 327 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 MKLN1Q9UL63 735 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 C15orf41Q9Y2V0 281 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 DTNAQ9Y4J8 743 aa10.86□□□□□ -0.67
PDLIM5-208ENST00000504489 MED12LQ86YW9 2145 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 C15orf38-AP3S2A0A0A6YYH1 394 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 NPIPA5A0A0B4J1W7 369 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 A0A0G2JPF8 293 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 HNRNPCL2B2RXH8 293 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 HNRNPCL3B7ZW38 293 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 NPIPA7E9PJI5 369 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 H3BNH8 94 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 NDUFB5O43674 189 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 HNRNPCL1O60812 293 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 UGT2B17O75795 530 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 CBR3O75828 277 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 BCHEP06276 602 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 RFPL3SP0C7P2 107 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 NPIPA8P0DM63 369 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 HNRNPCL4P0DMR1 293 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 EDN3P14138 238 aa10.85□□□□□ -0.67
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