RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 SCCPDHQ8NBX0 429 aa4.71□□□□□ -1.65
NIPBL-204ENST00000504430 OR5L2Q8NGL0 311 aa4.71□□□□□ -1.65
NIPBL-204ENST00000504430 GUCD1Q96NT3 240 aa4.71□□□□□ -1.65
NIPBL-204ENST00000504430 AGPAT1Q99943 283 aa4.71□□□□□ -1.65
NIPBL-204ENST00000504430 FUCA2Q9BTY2 467 aa4.71□□□□□ -1.65
NIPBL-204ENST00000504430 CALN1Q9BXU9 219 aa4.71□□□□□ -1.65
NIPBL-204ENST00000504430 SPRY4Q9C004 299 aa4.71□□□□□ -1.65
NIPBL-204ENST00000504430 TRIM4Q9C037 500 aa4.71□□□□□ -1.65
NIPBL-204ENST00000504430 RETNQ9HD89 108 aa4.71□□□□□ -1.65
NIPBL-204ENST00000504430 NTMQ9P121 344 aa4.71□□□□□ -1.65
NIPBL-204ENST00000504430 MRTO4Q9UKD2 239 aaKnown RBP4.71□□□□□ -1.65
NIPBL-204ENST00000504430 MMP24Q9Y5R2 645 aa4.71□□□□□ -1.65
NIPBL-204ENST00000504430 TCRBV5S1A1TA0A578 114 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 LINC00473A8K010 186 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 LRRN3E7EW58 273 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 HYAL3O43820 417 aaPredicted RBP4.71□□□□□ -1.66
NIPBL-204ENST00000504430 NADKO95544 446 aaPredicted RBP4.71□□□□□ -1.66
NIPBL-204ENST00000504430 TXNDC12O95881 172 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 IFNW1P05000 195 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 SFTPBP07988 381 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 UBTFL1P0CB47 393 aaPredicted RBP4.71□□□□□ -1.66
NIPBL-204ENST00000504430 SLC35E2BP0CK96 405 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 CALM1P0DP23 149 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 CALM2P0DP24 149 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 CALM3P0DP25 149 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 AHRP35869 848 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 GRIA3P42263 894 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 RBM34P42696 430 aaKnown RBP4.71□□□□□ -1.66
NIPBL-204ENST00000504430 ADARB1P78563 741 aaKnown RBP4.71□□□□□ -1.66
NIPBL-204ENST00000504430 MYL7Q01449 175 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 PTPRRQ15256 657 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 C5orf64Q2M2E5 130 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 SFT2D3Q587I9 215 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 SP5Q6BEB4 398 aaPredicted RBP4.71□□□□□ -1.66
NIPBL-204ENST00000504430 FAM71F2Q6NXP2 309 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 EMBQ6PCB8 327 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 CD164L2Q6UWJ8 174 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 TTLL10Q6ZVT0 673 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 TGIF2LXQ8IUE1 241 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 NPAS3Q8IXF0 933 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 SPAG16Q8N0X2 631 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 TERB1Q8NA31 727 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 DDHD1Q8NEL9 900 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 OR4C5Q8NGB2 326 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 OR13J1Q8NGT2 312 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 ADAMTS16Q8TE57 1224 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 BAALCQ8WXS3 180 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 C10orf90Q96M02 699 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 IL36GQ9NZH8 169 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 WDR45Q9Y484 360 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 WDR33Q9C0J8 1336 aaKnown RBP4.71□□□□□ -1.66
NIPBL-204ENST00000504430 A0A096LPK6 155 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 TMEM178BH3BS89 294 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 RAB29O14966 203 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 SYT7O43581 403 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 SLC19A2O60779 497 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 NPSP0C0P6 89 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 TFPTP0C1Z6 253 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 SAGP10523 405 aaPredicted RBP4.71□□□□□ -1.66
NIPBL-204ENST00000504430 ERVK11-1P61568 191 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 IL9RQ01113 521 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 SLC3A1Q07837 685 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 GOLGA7BQ2TAP0 167 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 XKR6Q5GH73 641 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 UTF1Q5T230 341 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 TRIM69Q86WT6 500 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 OR4Q3Q8NH05 313 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 BIRC7Q96CA5 298 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 LRRC2Q9BYS8 371 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 ABCB10Q9NRK6 738 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 THSD1Q9NS62 852 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 ANAPC7Q9UJX3 599 aa4.71□□□□□ -1.66
NIPBL-204ENST00000504430 E7ESA3 106 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 IMPA2O14732 288 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 LIN7AO14910 233 aaPredicted RBP4.7□□□□□ -1.66
NIPBL-204ENST00000504430 WDPCPO95876 746 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 PGAM1P18669 254 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 RPS15AP62244 130 aaKnown RBP4.7□□□□□ -1.66
NIPBL-204ENST00000504430 BTG1P62324 171 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 GUCY2DQ02846 1103 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 ILF2Q12905 390 aaKnown RBP4.7□□□□□ -1.66
NIPBL-204ENST00000504430 MAD2L1Q13257 205 aaPredicted RBP4.7□□□□□ -1.66
NIPBL-204ENST00000504430 CRMP1Q14194 572 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 SPHARQ15513 63 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 SLC15A2Q16348 729 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 NDUFAF6Q330K2 333 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 MARC1Q5VT66 337 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 OR4C11Q6IEV9 310 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 RBM44Q6ZP01 1051 aaKnown RBP4.7□□□□□ -1.66
NIPBL-204ENST00000504430 P4HA3Q7Z4N8 544 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 DCP1BQ8IZD4 617 aaKnown RBP4.7□□□□□ -1.66
NIPBL-204ENST00000504430 TAAR1Q96RJ0 339 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 RNF26Q9BY78 433 aaPredicted RBP4.7□□□□□ -1.66
NIPBL-204ENST00000504430 GPN2Q9H9Y4 310 aaPredicted RBP4.7□□□□□ -1.66
NIPBL-204ENST00000504430 KLHL13Q9P2N7 655 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 ENOPH1Q9UHY7 261 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 CDHR2Q9BYE9 1310 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 KANK1Q14678 1352 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 PRR23AA6NEV1 266 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 TMEM114B3SHH9 223 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms