RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 RASAL1O95294 804 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 RFPL3SP0C7P2 107 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 CALB2P22676 271 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 CPOXP36551 454 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 MASP1P48740 699 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 PLGLB1Q02325 96 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 LIPEQ05469 1076 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 FOXO1Q12778 655 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 KLHL26Q53HC5 615 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 FNDC7Q5VTL7 733 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 SLC30A6Q6NXT4 461 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 C6orf89Q6UWU4 347 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 NET1Q7Z628 596 aaPredicted RBP12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 VRK2Q86Y07 508 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 DEFB107AQ8IZN7 70 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 DUSP19Q8WTR2 217 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 NTNG2Q96CW9 530 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 FRMD6Q96NE9 622 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 SECISBP2Q96T21 854 aaKnown RBP12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 TREX2Q9BQ50 279 aaPredicted RBP12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 SAP130Q9H0E3 1048 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 TSPAN10Q9H1Z9 355 aaPredicted RBP12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 TMEM38AQ9H6F2 299 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 MYO18BQ8IUG5 2567 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 NCKAP5O14513 1909 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 PCNX3Q9H6A9 2034 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 HECTD1Q9ULT8 2610 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 C15orf38-AP3S2A0A0A6YYH1 394 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 ANKRD33BA6NCL7 494 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 TMEM247A6NEH6 219 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 GCM2O75603 506 aaPredicted RBP12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 PGM3O95394 542 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 ANGPTL1O95841 491 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 HPGDP15428 266 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 TCEA1P23193 301 aaKnown RBP12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 GSK3BP49841 420 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 CRISP3P54108 245 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 MLLT10P55197 1068 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 ZNF141Q15928 474 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 ZNF630Q2M218 657 aaPredicted RBP12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 ARPINQ7Z6K5 226 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 SERPINA11Q86U17 422 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 LSRQ86X29 649 aaPredicted RBP12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 PGAM4Q8N0Y7 254 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 WDSUB1Q8N9V3 476 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 C11orf65Q8NCR3 313 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 FAM156AQ8NDB6 213 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 PHOSPHO1Q8TCT1 267 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 SNRNP40Q96DI7 357 aaKnown RBP12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 SH3YL1Q96HL8 342 aaPredicted RBP12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 GNRHR2Q96P88 292 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 CDRT15Q96T59 188 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 RSPO3Q9BXY4 272 aaPredicted RBP12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 TTTY12Q9BZ98 90 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 HOXD1Q9GZZ0 328 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 MTHFD2LQ9H903 347 aaPredicted RBP12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 POLE3Q9NRF9 147 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 RYDENQ9NUL5 291 aaKnown RBP12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 THUMPD1Q9NXG2 353 aaKnown RBP12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 MED11Q9P086 117 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 TMEM181Q9P2C4 612 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 FBXL2Q9UKC9 423 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 ABCG2Q9UNQ0 655 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 DTNAQ9Y4J8 743 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 PCDHGB6Q9Y5F9 930 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 WIF1Q9Y5W5 379 aa12.11□□□□□ -0.47
PDLIM7-212ENST00000504380 A0A0G2JPF8 293 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 SERINC4A6NH21 518 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 TTLL8A6PVC2 850 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 FAM220BPB1ANY3 271 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 HNRNPCL2B2RXH8 293 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 HNRNPCL3B7ZW38 293 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 ALG1L2C9J202 215 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 SNPHO15079 494 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 ZNHIT1O43257 154 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 NDUFB5O43674 189 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 HNRNPCL1O60812 293 aaKnown RBP12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 SNX4O95219 450 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 OPN1SWP03999 348 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 NGFRP08138 427 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 CELA3AP09093 270 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 HNRNPCL4P0DMR1 293 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 TCN1P20061 433 aaPredicted RBP12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 MST1P26927 711 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 LCN1P31025 176 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 PCGF2P35227 344 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 MSX2P35548 267 aaPredicted RBP12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 CLK3P49761 638 aaKnown RBP12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 MNAT1P51948 309 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 PPIAP62937 165 aaKnown RBP12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 BNIP1Q12981 228 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 SNTA1Q13424 505 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 VMACQ2NL98 169 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 TBCELQ5QJ74 424 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 REEP3Q6NUK4 255 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 RPUSD3Q6P087 351 aaKnown RBP12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 TMEM81Q6P7N7 255 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 C16orf89Q6UX73 402 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 PACS2Q86VP3 889 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms