RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 CLDN8P56748 225 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 DAOAP59103 153 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 RAB8AP61006 207 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 HOXC5Q00444 222 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 SNTB1Q13884 538 aaKnown RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ZNF234Q14588 700 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 SWI5Q1ZZU3 235 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 GCNT6Q5T4J0 391 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 AFMIDQ63HM1 303 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 SLC8B1Q6J4K2 584 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 C8orf82Q6P1X6 216 aaPredicted RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 TMEM220Q6QAJ8 160 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 PRSS55Q6UWB4 352 aaPredicted RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 SPATA19Q7Z5L4 167 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 VTCN1Q7Z7D3 282 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 CCDC190Q86UF4 302 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 THNSL2Q86YJ6 484 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ZC3H3Q8IXZ2 948 aaKnown RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 PARP16Q8N5Y8 322 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 LRRC52Q8N7C0 313 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 YIPF7Q8N8F6 280 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 OR10A7Q8NGE5 316 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 CXorf40AQ8TE69 158 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 SLC22A17Q8WUG5 538 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 TSEN15Q8WW01 171 aaKnown RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 SLC38A4Q969I6 547 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 MUL1Q969V5 352 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 AP2M1Q96CW1 435 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ASB9Q96DX5 294 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 MVB12AQ96EY5 273 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 CCDC74BQ96LY2 380 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 RDH12Q96NR8 316 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 TMEM209Q96SK2 561 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 FAM129BQ96TA1 746 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 PHOX2BQ99453 314 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 LRRC3Q9BY71 257 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 YTHDF1Q9BYJ9 559 aaKnown RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 SLC22A4Q9H015 551 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 SLC25A51Q9H1U9 297 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ANKRA2Q9H9E1 313 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 FBRSQ9HAH7 460 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 C1orf109Q9NX04 203 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 MIOSQ9NXC5 875 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ZDHHC3Q9NYG2 299 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ACTR10Q9NZ32 417 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 MRPL15Q9P015 296 aaKnown RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ACSL6Q9UKU0 697 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 PADI3Q9ULW8 664 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 GPR34Q9UPC5 381 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 SLC27A6Q9Y2P4 619 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 RNF115Q9Y4L5 304 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 TEX264Q9Y6I9 313 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 V9GYH0 126 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 PTPRJQ12913 1337 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 LOC100130705A0A1B0GUX0 176 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 A0A1W2PQ45 241 aaPredicted RBP3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 A0A1W2PQY0 241 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 A6NIN4 97 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 SLC22A31A6NKX4 558 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 COLCA2A8K830 154 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 LOC730098B7Z3J9 87 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 MKRN2OSH3BPM6 223 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 K7EP13 123 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 HRKO00198 91 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 PRODHO43272 600 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 ORC5O43913 435 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 ERN1O75460 977 aaKnown RBP3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 RFPL1O75677 317 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 SLC25A12O75746 678 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 PRH1P02810 166 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 LPLP06858 475 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 TPOP07202 933 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 HOXC6P09630 235 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 LINC00614P0C842 121 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 PGAM2P15259 253 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 CELP19835 753 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 TACR2P21452 398 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 GRK5P34947 590 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 ETV5P41161 510 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 MAGEA12P43365 314 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 ZNF81P51508 661 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 KCNQ1P51787 676 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 FGF8P55075 233 aaPredicted RBP3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 OR12D2P58182 307 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 SMIM11AP58511 58 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 NCS1P62166 190 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 ERVK-25P63136 954 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 ADARB1P78563 741 aaKnown RBP3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 MAT1AQ00266 395 aaKnown RBP3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 RING1Q06587 406 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 FGL1Q08830 312 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 PCLAFQ15004 111 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 ZNHIT3Q15649 155 aaPredicted RBP3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 SCGB2B2Q4G0G5 96 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 CAPN13Q6MZZ7 669 aaPredicted RBP3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 CD300LGQ6UXG3 332 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 PAMR1Q6UXH9 720 aa3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 ZNF517Q6ZMY9 492 aaPredicted RBP3.45□□□□□ -1.86
PCDH11X-208ENST00000504220 ZC3HC1Q86WB0 502 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms