RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 C3orf49Q96BT1 292 aa14□□□□□ -0.17
PDLIM7-210ENST00000503827 NXNL1Q96CM4 212 aa14□□□□□ -0.17
PDLIM7-210ENST00000503827 PRR14Q9BWN1 585 aa14□□□□□ -0.17
PDLIM7-210ENST00000503827 KLHL13Q9P2N7 655 aa14□□□□□ -0.17
PDLIM7-210ENST00000503827 SLC12A4Q9UP95 1085 aa14□□□□□ -0.17
PDLIM7-210ENST00000503827 TNPO3Q9Y5L0 923 aaKnown RBP14□□□□□ -0.17
PDLIM7-210ENST00000503827 TENM1Q9UKZ4 2725 aa13.99□□□□□ -0.17
PDLIM7-210ENST00000503827 HEATR1Q9H583 2144 aaKnown RBP13.99□□□□□ -0.17
PDLIM7-210ENST00000503827 VWC2LB2RUY7 222 aa13.99□□□□□ -0.17
PDLIM7-210ENST00000503827 NDUFS8O00217 210 aa13.99□□□□□ -0.17
PDLIM7-210ENST00000503827 PLOD3O60568 738 aa13.99□□□□□ -0.17
PDLIM7-210ENST00000503827 LYZL6O75951 148 aa13.99□□□□□ -0.17
PDLIM7-210ENST00000503827 SRP14P37108 136 aaKnown RBP13.99□□□□□ -0.17
PDLIM7-210ENST00000503827 PDLIM4P50479 330 aa13.99□□□□□ -0.17
PDLIM7-210ENST00000503827 PSMD4P55036 377 aaKnown RBP13.99□□□□□ -0.17
PDLIM7-210ENST00000503827 TRA2BP62995 288 aaKnown RBP13.99□□□□□ -0.17
PDLIM7-210ENST00000503827 ACAP2Q15057 778 aa13.99□□□□□ -0.17
PDLIM7-210ENST00000503827 TIMM23BQ5SRD1 257 aa13.99□□□□□ -0.17
PDLIM7-210ENST00000503827 TMEM108Q6UXF1 575 aa13.99□□□□□ -0.17
PDLIM7-210ENST00000503827 C3orf56Q8N813 242 aa13.99□□□□□ -0.17
PDLIM7-210ENST00000503827 RHEBL1Q8TAI7 183 aa13.99□□□□□ -0.17
PDLIM7-210ENST00000503827 ACTRT1Q8TDG2 376 aa13.99□□□□□ -0.17
PDLIM7-210ENST00000503827 PIMREGQ9BSJ6 248 aa13.99□□□□□ -0.17
PDLIM7-210ENST00000503827 TMEM185BQ9H7F4 350 aa13.99□□□□□ -0.17
PDLIM7-210ENST00000503827 NOL11Q9H8H0 719 aaKnown RBP13.99□□□□□ -0.17
PDLIM7-210ENST00000503827 GP6Q9HCN6 339 aa13.99□□□□□ -0.17
PDLIM7-210ENST00000503827 TIGARQ9NQ88 270 aa13.99□□□□□ -0.17
PDLIM7-210ENST00000503827 JRKLQ9Y4A0 524 aa13.99□□□□□ -0.17
PDLIM7-210ENST00000503827 PMF1-BGLAPU3KQ54 211 aa13.99□□□□□ -0.17
PDLIM7-210ENST00000503827 GOLGA8QA0A0J9YX86 632 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 ESYT3A0FGR9 886 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 GOLGA8OA6NCC3 632 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 ZNF814B7Z6K7 855 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 GOLGA8NF8WBI6 632 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 GOLGA8RI6L899 631 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 COQ9O75208 318 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 CTAGE8P0CG41 777 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 CRABP2P29373 138 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 SPRP35270 261 aaPredicted RBP13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 NR4A2P43354 598 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 CCNG1P51959 295 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 PRR5P85299 388 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 CHRNB3Q05901 458 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 GALNT1Q10472 559 aaPredicted RBP13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 CSTF3Q12996 717 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 ZNF239Q16600 458 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 SGO1Q5FBB7 561 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 CPTPQ5TA50 214 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 METTL2BQ6P1Q9 378 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 Q6ZT83 130 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 CMC1Q7Z7K0 106 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 P2RY8Q86VZ1 359 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 CTAGE4Q8IX94 777 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 ZBED8Q8IZ13 594 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 FAM9CQ8IZT9 166 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 OR7G2Q8NG99 324 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 ZFAND2BQ8WV99 257 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 SLC9A6Q92581 669 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 CPNE4Q96A23 557 aaPredicted RBP13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 ZBTB8AQ96BR9 441 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 KLHL15Q96M94 604 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 RNF145Q96MT1 663 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 ELOVL6Q9H5J4 265 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 HHATLQ9HCP6 504 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 Q9N2J8 555 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 GIMAP4Q9NUV9 329 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 NPAP1Q9NZP6 1156 aa13.98□□□□□ -0.17
PDLIM7-210ENST00000503827 C7orf72A4D263 438 aa13.97□□□□□ -0.17
PDLIM7-210ENST00000503827 E7ESA3 106 aa13.97□□□□□ -0.17
PDLIM7-210ENST00000503827 OR7A17O14581 309 aa13.97□□□□□ -0.17
PDLIM7-210ENST00000503827 LY6HO94772 140 aa13.97□□□□□ -0.17
PDLIM7-210ENST00000503827 PRKD3O94806 890 aa13.97□□□□□ -0.17
PDLIM7-210ENST00000503827 UTS2O95399 124 aa13.97□□□□□ -0.17
PDLIM7-210ENST00000503827 IL33O95760 270 aa13.97□□□□□ -0.17
PDLIM7-210ENST00000503827 YES1P07947 543 aa13.97□□□□□ -0.17
PDLIM7-210ENST00000503827 DHRS4L1P0CG22 281 aa13.97□□□□□ -0.17
PDLIM7-210ENST00000503827 COL6A2P12110 1019 aa13.97□□□□□ -0.17
PDLIM7-210ENST00000503827 SSTR1P30872 391 aa13.97□□□□□ -0.17
PDLIM7-210ENST00000503827 RFX3P48380 749 aa13.97□□□□□ -0.17
PDLIM7-210ENST00000503827 ZNF41P51814 821 aaPredicted RBP13.97□□□□□ -0.17
PDLIM7-210ENST00000503827 TCHHL1Q5QJ38 904 aaPredicted RBP13.97□□□□□ -0.17
PDLIM7-210ENST00000503827 ZNF544Q6NX49 715 aa13.97□□□□□ -0.17
PDLIM7-210ENST00000503827 PPM1NQ8N819 430 aa13.97□□□□□ -0.17
PDLIM7-210ENST00000503827 CDYL2Q8N8U2 506 aa13.97□□□□□ -0.17
PDLIM7-210ENST00000503827 EXOSC8Q96B26 276 aaKnown RBP13.97□□□□□ -0.17
PDLIM7-210ENST00000503827 NPAS1Q99742 590 aa13.97□□□□□ -0.17
PDLIM7-210ENST00000503827 NMRK1Q9NWW6 199 aa13.97□□□□□ -0.17
PDLIM7-210ENST00000503827 A0A0A6YYJ9 748 aa13.96□□□□□ -0.17
PDLIM7-210ENST00000503827 CCDC189A1A4V9 331 aa13.96□□□□□ -0.17
PDLIM7-210ENST00000503827 GOLGA6L6A8MZA4 724 aa13.96□□□□□ -0.17
PDLIM7-210ENST00000503827 SLCO1B7G3V0H7 640 aa13.96□□□□□ -0.17
PDLIM7-210ENST00000503827 GGT1P19440 569 aa13.96□□□□□ -0.17
PDLIM7-210ENST00000503827 PTAFRP25105 342 aa13.96□□□□□ -0.17
PDLIM7-210ENST00000503827 PSMA4P25789 261 aaKnown RBP13.96□□□□□ -0.17
PDLIM7-210ENST00000503827 MPIP34949 423 aa13.96□□□□□ -0.17
PDLIM7-210ENST00000503827 ACTG1P63261 375 aa13.96□□□□□ -0.17
PDLIM7-210ENST00000503827 IQCCQ4KMZ1 466 aa13.96□□□□□ -0.17
PDLIM7-210ENST00000503827 PDLIM3Q53GG5 364 aaPredicted RBP13.96□□□□□ -0.17
PDLIM7-210ENST00000503827 GRTP1Q5TC63 336 aa13.96□□□□□ -0.17
PDLIM7-210ENST00000503827 KLHL17Q6TDP4 642 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms