RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 DGCR6Q14129 220 aa10.8□□□□□ -0.68
USP46-204ENST00000503060 EFR3AQ14156 821 aa10.8□□□□□ -0.68
USP46-204ENST00000503060 FAM214AQ32MH5 1076 aa10.8□□□□□ -0.68
USP46-204ENST00000503060 ZNF311Q5JNZ3 666 aa10.8□□□□□ -0.68
USP46-204ENST00000503060 TMEM236Q5W0B7 351 aa10.8□□□□□ -0.68
USP46-204ENST00000503060 HEPHL1Q6MZM0 1159 aa10.8□□□□□ -0.68
USP46-204ENST00000503060 ARMC6Q6NXE6 501 aa10.8□□□□□ -0.68
USP46-204ENST00000503060 CDC73Q6P1J9 531 aa10.8□□□□□ -0.68
USP46-204ENST00000503060 PGBD2Q6P3X8 592 aa10.8□□□□□ -0.68
USP46-204ENST00000503060 SPATC1Q76KD6 591 aa10.8□□□□□ -0.68
USP46-204ENST00000503060 ZNF438Q7Z4V0 828 aa10.8□□□□□ -0.68
USP46-204ENST00000503060 WDR53Q7Z5U6 358 aaPredicted RBP10.8□□□□□ -0.68
USP46-204ENST00000503060 GGHQ92820 318 aa10.8□□□□□ -0.68
USP46-204ENST00000503060 PRRC1Q96M27 445 aa10.8□□□□□ -0.68
USP46-204ENST00000503060 FNDC11Q9BVV2 318 aa10.8□□□□□ -0.68
USP46-204ENST00000503060 POMT2Q9UKY4 750 aa10.8□□□□□ -0.68
USP46-204ENST00000503060 SPACA6W5XKT8 324 aa10.8□□□□□ -0.68
USP46-204ENST00000503060 DUXAA6NLW8 204 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 M0R129 80 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 GALR3O60755 368 aaPredicted RBP10.79□□□□□ -0.68
USP46-204ENST00000503060 ZBTB11O95625 1053 aaPredicted RBP10.79□□□□□ -0.68
USP46-204ENST00000503060 POU1F1P28069 291 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 TAGLN2P37802 199 aaKnown RBP10.79□□□□□ -0.68
USP46-204ENST00000503060 VSX2P58304 361 aaPredicted RBP10.79□□□□□ -0.68
USP46-204ENST00000503060 RAB14P61106 215 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 ID2Q02363 134 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 ILKQ13418 452 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 CCDC85BQ15834 202 aaPredicted RBP10.79□□□□□ -0.68
USP46-204ENST00000503060 PODNL1Q6PEZ8 512 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 OR2L13Q8N349 312 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 SLC16A11Q8NCK7 471 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 GAB3Q8WWW8 586 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 MYDGFQ969H8 173 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 YIPF6Q96EC8 236 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 ARHGDIGQ99819 225 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 SEMA6CQ9H3T2 930 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 IL21RQ9HBE5 538 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 AMBNQ9NP70 447 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 MAN2C1Q9NTJ4 1040 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 PTGFRNQ9P2B2 879 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 SLC6A14Q9UN76 642 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 CLCA1A8K7I4 914 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 FAM47E-STBD1D6RA91 191 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 BCAS1O75363 584 aaPredicted RBP10.79□□□□□ -0.68
USP46-204ENST00000503060 ZIC2O95409 532 aaPredicted RBP10.79□□□□□ -0.68
USP46-204ENST00000503060 WNT1P04628 370 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 CDK1P06493 297 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 ST6GAL1P15907 406 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 ZNF182P17025 639 aaPredicted RBP10.79□□□□□ -0.68
USP46-204ENST00000503060 PSMB9P28065 219 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 CNR2P34972 360 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 SOX18P35713 384 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 PDX1P52945 283 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 NUDT6P53370 316 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 AQP6Q13520 282 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 SMAD2Q15796 467 aaKnown RBP10.79□□□□□ -0.68
USP46-204ENST00000503060 ZNF628Q5EBL2 1059 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 VRK2Q86Y07 508 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 SHISA5Q8N114 240 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 TMEM52Q8NDY8 209 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 Q8NFD4 153 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 OR5T3Q8NGG3 340 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 OR10Z1Q8NGY1 313 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 ZG16BQ96DA0 208 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 CCDC3Q9BQI4 270 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 OR10A4Q9H209 315 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 SERINC1Q9NRX5 453 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 SLC13A4Q9UKG4 626 aa10.79□□□□□ -0.68
USP46-204ENST00000503060 A0A1W2PPL8 197 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 CYR61O00622 381 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 HCRTR1O43613 425 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 MPZL2O60487 215 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 GABARAPO95166 117 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 BCL10O95999 233 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 NR4A1P22736 598 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 ETV5P41161 510 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 MAZP56270 477 aaKnown RBP10.78□□□□□ -0.68
USP46-204ENST00000503060 RNF4P78317 190 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 HPCAP84074 193 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 SHC2P98077 582 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 FZD5Q13467 585 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 CTF1Q16619 201 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 FAM209BQ5JX69 171 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 UBE2UQ5VVX9 321 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 SLC38A6Q8IZM9 456 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 CA13Q8N1Q1 262 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 LINC00471Q8N535 108 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 DEFB119Q8N690 84 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 SIMC1Q8NDZ2 872 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 FANK1Q8TC84 345 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 CDS1Q92903 461 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 WACQ9BTA9 647 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 POLR2J3Q9H1A7 115 aaKnown RBP10.78□□□□□ -0.68
USP46-204ENST00000503060 FAM60AQ9NP50 221 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 STARD5Q9NSY2 213 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 FGF17O60258 216 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 TPST2O60704 377 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 LDB3O75112 727 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 SOX14O95416 240 aa10.78□□□□□ -0.68
USP46-204ENST00000503060 GPR75O95800 540 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms