RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 GNB5O14775 395 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 LDLRAD4O15165 306 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 NIPSNAP2O75323 286 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 LALBAP00709 142 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 ANXA3P12429 323 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 ATP4BP51164 291 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 CRYBA2P53672 197 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 EPHA4P54764 986 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 TIAL1Q01085 375 aaKnown RBP eCLIP5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 GK2Q14410 553 aaPredicted RBP5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 DMC1Q14565 340 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 IHHQ14623 411 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 SLC9A5Q14940 896 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 SGO1Q5FBB7 561 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 TMEM240Q5SV17 173 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 NCMAPQ5T1S8 102 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 KANK2Q63ZY3 851 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 OR5M10Q6IEU7 315 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 OR7E24Q6IFN5 339 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 LILRA6Q6PI73 481 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 Q6ZSR9 355 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 TMEM25Q86YD3 366 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 RBFAQ8N0V3 343 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 CLDN19Q8N6F1 224 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 ZNF321PQ8N8H1 164 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 DMBX1Q8NFW5 382 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 OR1M1Q8NGA1 313 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 ARRDC2Q8TBH0 407 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 SCRN2Q96FV2 425 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 ZC3HAV1LQ96H79 300 aaKnown RBP5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 CDKN2AIPNLQ96HQ2 116 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 PPP1R16AQ96I34 528 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 MSLNLQ96KJ4 702 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 IL4I1Q96RQ9 567 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 CDX2Q99626 313 aaPredicted RBP5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 CDC6Q99741 560 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 SOSTQ9BQB4 213 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 INPP5KQ9BT40 448 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 ZNF436Q9C0F3 470 aaPredicted RBP5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 PCED1AQ9H1Q7 454 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 CHRDQ9H2X0 955 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 OR51J1Q9H342 316 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 TMEM231Q9H6L2 316 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 ASB8Q9H765 288 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 EQTNQ9NQ60 294 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 KLHL9Q9P2J3 617 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 MID2Q9UJV3 735 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 SSR3Q9UNL2 185 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 INSL6Q9Y581 213 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 MYOFQ9NZM1 2061 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 ZNF236Q9UL36 1845 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 CFAP54Q96N23 3096 aa5.42□□□□□ -1.54
SOX2-OT-218ENST00000498731 OR6C76A6NM76 312 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 CLDN4O14493 209 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 SPDEFO95238 335 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 TGM6O95932 706 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 CXCL10P02778 98 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 FGF1P05230 155 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 ZNF44P15621 663 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 HLA-DPA1P20036 260 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 ITPKAP23677 461 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 MAPK3P27361 379 aaPredicted RBP5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 HOXD9P28356 352 aaPredicted RBP5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 SHC1P29353 583 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 AKT1P31749 480 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 CD70P32970 193 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 SOX18P35713 384 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 PPT1P50897 306 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 CARD18P57730 90 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 UBE2MP61081 183 aaKnown RBP5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 RPS25P62851 125 aaKnown RBP5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 RING1Q06587 406 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 MAP4K2Q12851 820 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 BOP1Q14137 746 aaKnown RBP5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 ZSWIM7Q19AV6 140 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 RFTN2Q52LD8 501 aaPredicted RBP5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 AADACL4Q5VUY2 407 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 RAB11FIP2Q7L804 512 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 SHFQ7M4L6 423 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 RAB44Q7Z6P3 723 aaPredicted RBP5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 SLITRK4Q8IW52 837 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 ADHFE1Q8IWW8 467 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 ADGRF3Q8IZF5 1079 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 SETD9Q8NE22 299 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 OR10H5Q8NGA6 315 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 OR9Q2Q8NGE9 314 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 TM9SF4Q92544 642 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 GTPBP3Q969Y2 492 aaKnown RBP5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 MNTQ99583 582 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 GPR21Q99679 349 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 NAA11Q9BSU3 229 aaPredicted RBP5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 SLC46A2Q9BY10 475 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 ZCCHC2Q9C0B9 1178 aaKnown RBP5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 NRIP3Q9NQ35 241 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 LRFN1Q9P244 771 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 NDRG3Q9UGV2 375 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 LEF1Q9UJU2 399 aaPredicted RBP5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 LSM2Q9Y333 95 aaKnown RBP5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 CACNA1HO95180 2353 aa5.41□□□□□ -1.54
SOX2-OT-218ENST00000498731 GLYATL1P3A0A0U1RQE8 302 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms