RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 ST3GAL4Q11206 333 aa8.35□□□□□ -1.07
FN1-227ENST00000498719 AIMP2Q13155 320 aaKnown RBP8.35□□□□□ -1.07
FN1-227ENST00000498719 TP53BP2Q13625 1128 aa8.35□□□□□ -1.07
FN1-227ENST00000498719 CARTPTQ16568 116 aa8.35□□□□□ -1.07
FN1-227ENST00000498719 ZNF658BQ4V348 819 aaPredicted RBP8.35□□□□□ -1.07
FN1-227ENST00000498719 SFRP5Q5T4F7 317 aa8.35□□□□□ -1.07
FN1-227ENST00000498719 ARHGAP40Q5TG30 622 aa8.35□□□□□ -1.07
FN1-227ENST00000498719 SAMD5Q5TGI4 173 aa8.35□□□□□ -1.07
FN1-227ENST00000498719 PLPP4Q5VZY2 271 aa8.35□□□□□ -1.07
FN1-227ENST00000498719 PLEKHG7Q6ZR37 379 aa8.35□□□□□ -1.07
FN1-227ENST00000498719 PRR23CQ6ZRP0 262 aa8.35□□□□□ -1.07
FN1-227ENST00000498719 ZNF547Q8IVP9 402 aa8.35□□□□□ -1.07
FN1-227ENST00000498719 SLC22A8Q8TCC7 542 aa8.35□□□□□ -1.07
FN1-227ENST00000498719 ZNF675Q8TD23 568 aa8.35□□□□□ -1.07
FN1-227ENST00000498719 SLAMF9Q96A28 289 aa8.35□□□□□ -1.07
FN1-227ENST00000498719 C5orf30Q96GV9 206 aa8.35□□□□□ -1.07
FN1-227ENST00000498719 MSANTD3Q96H12 275 aa8.35□□□□□ -1.07
FN1-227ENST00000498719 LRRC3BQ96PB8 259 aa8.35□□□□□ -1.07
FN1-227ENST00000498719 VPS35Q96QK1 796 aa8.35□□□□□ -1.07
FN1-227ENST00000498719 ZDHHC4Q9NPG8 344 aa8.35□□□□□ -1.07
FN1-227ENST00000498719 ACER3Q9NUN7 267 aa8.35□□□□□ -1.07
FN1-227ENST00000498719 MS4A12Q9NXJ0 267 aa8.35□□□□□ -1.07
FN1-227ENST00000498719 KIF26AQ9ULI4 1882 aaPredicted RBP8.35□□□□□ -1.07
FN1-227ENST00000498719 SNRNP200O75643 2136 aaKnown RBP8.35□□□□□ -1.07
FN1-227ENST00000498719 TRPM6Q9BX84 2022 aa8.35□□□□□ -1.07
FN1-227ENST00000498719 CXorf51AA0A1B0GTR3 108 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 FAM90A7PA6NKC0 464 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 FAM90A22PA8MWA6 464 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 FAM90A12PA8MX19 464 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 FAM90A23PA8MXZ1 464 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 A8MZ25 164 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 QSOX1O00391 747 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 DSCR3O14972 297 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 FKTNO75072 461 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 GHRHP01286 108 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 RHOP08100 348 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 LINC00271P0C7V0 271 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 C1GALT1C1LP0DN25 315 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 CD40LGP29965 261 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 EIF2B2P49770 351 aaKnown RBP8.34□□□□□ -1.07
FN1-227ENST00000498719 FADDQ13158 208 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 E2F2Q14209 437 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 PTGES3Q15185 160 aaKnown RBP8.34□□□□□ -1.07
FN1-227ENST00000498719 FAM71E1Q6IPT2 247 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 ZNF605Q86T29 641 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 SFTPA1Q8IWL2 248 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 CLIP4Q8N3C7 705 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 ZNF707Q96C28 371 aaPredicted RBP8.34□□□□□ -1.07
FN1-227ENST00000498719 METTL2AQ96IZ6 378 aaKnown RBP8.34□□□□□ -1.07
FN1-227ENST00000498719 Q96MT0 163 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 OR5M11Q96RB7 305 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 TPPP3Q9BW30 176 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 TAS2R9Q9NYW1 312 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 TAAR2Q9P1P5 351 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 DYRK1BQ9Y463 629 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 A0A1W2PRB8 838 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 TSPAN11A1L157 253 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 ZNF197O14709 1029 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 SPDEFO95238 335 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 GASTP01350 101 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 IGFBP1P08833 259 aaPredicted RBP8.34□□□□□ -1.07
FN1-227ENST00000498719 CCL5P13501 91 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 HOXB1P14653 301 aaPredicted RBP8.34□□□□□ -1.07
FN1-227ENST00000498719 POU1F1P28069 291 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 CTNNB1P35222 781 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 FEN1P39748 380 aaKnown RBP8.34□□□□□ -1.07
FN1-227ENST00000498719 XCR1P46094 333 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 PDE7AQ13946 482 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 ZNF77Q15935 545 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 Q3ZCU0 254 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 ZNF404Q494X3 552 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 IGSF11Q5DX21 431 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 ARMCX4Q5H9R4 360 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 RAET1GQ6H3X3 334 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 TNFAIP8L2Q6P589 184 aaPredicted RBP8.34□□□□□ -1.07
FN1-227ENST00000498719 TMC5Q6UXY8 1006 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 SLC46A3Q7Z3Q1 461 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 ZNF573Q86YE8 665 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 KLHDC8AQ8IYD2 350 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 LAS2Q8IYD9 372 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 LRRC56Q8IYG6 542 aaPredicted RBP8.34□□□□□ -1.07
FN1-227ENST00000498719 STX19Q8N4C7 294 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 AQP11Q8NBQ7 271 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 FAM83FQ8NEG4 500 aaPredicted RBP8.34□□□□□ -1.07
FN1-227ENST00000498719 B3GNT7Q8NFL0 401 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 RSC1A1Q92681 617 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 DTD2Q96FN9 168 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 SGPP1Q9BX95 441 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 CXorf36Q9H7Y0 433 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 SLAMF7Q9NQ25 335 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 FKBP14Q9NWM8 211 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 IMPAD1Q9NX62 359 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 POFUT2Q9Y2G5 429 aa8.34□□□□□ -1.07
FN1-227ENST00000498719 NUP210Q8TEM1 1887 aaPredicted RBP8.33□□□□□ -1.08
FN1-227ENST00000498719 TRBV4-1A0A0J9YWV2 114 aa8.33□□□□□ -1.08
FN1-227ENST00000498719 C2orf92A0A1B0GVN3 265 aa8.33□□□□□ -1.08
FN1-227ENST00000498719 A0A1W2PQM1 296 aa8.33□□□□□ -1.08
FN1-227ENST00000498719 METTL15A6NJ78 407 aa8.33□□□□□ -1.08
FN1-227ENST00000498719 FFAR1O14842 300 aa8.33□□□□□ -1.08
FN1-227ENST00000498719 SEMA7AO75326 666 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms