RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 PRG3Q9Y2Y8 225 aaPredicted RBP3.66□□□□□ -1.82
CLTC-209ENST00000498711 PCDHB7Q9Y5E2 793 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 CDH10Q9Y6N8 788 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 STON1Q9Y6Q2 735 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 PRUNE2Q8WUY3 3088 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 USP34Q70CQ2 3546 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 DENND4CQ5VZ89 1909 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 TEX51A0A1B0GUA7 166 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 HYAL3O43820 417 aaPredicted RBP3.66□□□□□ -1.82
CLTC-209ENST00000498711 C1orf105O95561 183 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 POP4O95707 220 aaKnown RBP3.66□□□□□ -1.82
CLTC-209ENST00000498711 RAB36O95755 333 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 ACP2P11117 423 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 TNFRSF1BP20333 461 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 GABRA5P31644 462 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 VIPR1P32241 457 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 ETV5P41161 510 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 MAN2A2P49641 1150 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 ETV1P50549 477 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 ARPC4P59998 168 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 DSTNP60981 165 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 RPS13P62277 151 aaKnown RBP3.66□□□□□ -1.82
CLTC-209ENST00000498711 SNRPD1P62314 119 aaKnown RBP3.66□□□□□ -1.82
CLTC-209ENST00000498711 TRA2BP62995 288 aaKnown RBP3.66□□□□□ -1.82
CLTC-209ENST00000498711 TWF1Q12792 350 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 RAB40BQ12829 278 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 ZNF155Q12901 538 aaPredicted RBP3.66□□□□□ -1.82
CLTC-209ENST00000498711 SF3A2Q15428 464 aaKnown RBP3.66□□□□□ -1.82
CLTC-209ENST00000498711 CARTPTQ16568 116 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 SLC5A12Q1EHB4 618 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 PLA1AQ53H76 456 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 ARHGAP15Q53QZ3 475 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 C6orf183Q5T699 404 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 LCTLQ6UWM7 567 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 TMEM107Q6UX40 140 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 SERPINA13PQ6UXR4 307 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 GDPD4Q6W3E5 623 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 ZNF782Q6ZMW2 699 aaPredicted RBP3.66□□□□□ -1.82
CLTC-209ENST00000498711 YAF2Q8IY57 180 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 OR8H2Q8N162 312 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 FAM109AQ8N4B1 249 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 POGLUT1Q8NBL1 392 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 SPPL2AQ8TCT8 520 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 ZBED6CLQ96FA7 236 aaPredicted RBP3.66□□□□□ -1.82
CLTC-209ENST00000498711 ZSWIM3Q96MP5 696 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 TEFMQ96QE5 360 aaKnown RBP3.66□□□□□ -1.82
CLTC-209ENST00000498711 TCF25Q9BQ70 676 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 EFCAB11Q9BUY7 163 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 FAM83DQ9H4H8 585 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 BRD9Q9H8M2 597 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 RANGRFQ9HD47 186 aaPredicted RBP3.66□□□□□ -1.82
CLTC-209ENST00000498711 PLSCR3Q9NRY6 295 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 MAN2C1Q9NTJ4 1040 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 PTTG3PQ9NZH4 202 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 TAAR2Q9P1P5 351 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 CFAP97Q9P2B7 532 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 DKK3Q9UBP4 350 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 EIF3KQ9UBQ5 218 aaKnown RBP3.66□□□□□ -1.82
CLTC-209ENST00000498711 NUFIP1Q9UHK0 495 aaKnown RBP3.66□□□□□ -1.82
CLTC-209ENST00000498711 ADAM29Q9UKF5 820 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 CDC42EP3Q9UKI2 254 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 ELF5Q9UKW6 265 aaPredicted RBP3.66□□□□□ -1.82
CLTC-209ENST00000498711 CLEC4EQ9ULY5 219 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 LIPT1Q9Y234 373 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 EXOSC1Q9Y3B2 195 aaKnown RBP3.66□□□□□ -1.82
CLTC-209ENST00000498711 CHD7Q9P2D1 2997 aa3.66□□□□□ -1.82
CLTC-209ENST00000498711 KIAA0100Q14667 2235 aaKnown RBP3.65□□□□□ -1.82
CLTC-209ENST00000498711 COL4A2P08572 1712 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 C17orf113A0A1B0GUU1 675 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 C7orf66A4D0T2 115 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 OR14I1A6ND48 311 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 A6NL46 340 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 PDE9AO76083 593 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 SOD1P00441 154 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 IFNW1P05000 195 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 LAG3P18627 525 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 ACADLP28330 430 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 ARL1P40616 181 aaPredicted RBP3.65□□□□□ -1.82
CLTC-209ENST00000498711 OR1E2P47887 323 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 RFX3P48380 749 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 IDH2P48735 452 aaKnown RBP3.65□□□□□ -1.82
CLTC-209ENST00000498711 WNT4P56705 351 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 RAB25P57735 213 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 DUSP2Q05923 314 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 HSPA14Q0VDF9 509 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 DMC1Q14565 340 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 VEPH1Q14D04 833 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 MED22Q15528 200 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 HSD17B12Q53GQ0 312 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 SYT14P1Q58G82 188 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 LCN1P1Q5VSP4 162 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 AADACL4Q5VUY2 407 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 C22orf39Q6P5X5 142 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 PRSS55Q6UWB4 352 aaPredicted RBP3.65□□□□□ -1.82
CLTC-209ENST00000498711 FAM83HQ6ZRV2 1179 aaPredicted RBP3.65□□□□□ -1.82
CLTC-209ENST00000498711 DPPA4Q7L190 304 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 COMMD6Q7Z4G1 85 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 TMEM173Q86WV6 379 aaPredicted RBP3.65□□□□□ -1.82
CLTC-209ENST00000498711 TBC1D19Q8N5T2 526 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 HORMAD2Q8N7B1 307 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms