RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 TMEM201Q5SNT2 666 aa12.4□□□□□ -0.42
CCDC58-207ENST00000498466 PDSS1Q5T2R2 415 aa12.4□□□□□ -0.42
CCDC58-207ENST00000498466 CLEC2AQ6UVW9 174 aa12.4□□□□□ -0.42
CCDC58-207ENST00000498466 APOOLQ6UXV4 268 aa12.4□□□□□ -0.42
CCDC58-207ENST00000498466 TFAP2EQ6VUC0 442 aa12.4□□□□□ -0.42
CCDC58-207ENST00000498466 DNAJC14Q6Y2X3 702 aaPredicted RBP12.4□□□□□ -0.42
CCDC58-207ENST00000498466 EXOC3L1Q86VI1 746 aa12.4□□□□□ -0.42
CCDC58-207ENST00000498466 GABRG1Q8N1C3 465 aa12.4□□□□□ -0.42
CCDC58-207ENST00000498466 GTPBP8Q8N3Z3 284 aaPredicted RBP12.4□□□□□ -0.42
CCDC58-207ENST00000498466 CDYL2Q8N8U2 506 aa12.4□□□□□ -0.42
CCDC58-207ENST00000498466 BANPQ8N9N5 519 aa12.4□□□□□ -0.42
CCDC58-207ENST00000498466 ZNF483Q8TF39 744 aaPredicted RBP12.4□□□□□ -0.42
CCDC58-207ENST00000498466 C16orf78Q8WTQ4 265 aa12.4□□□□□ -0.42
CCDC58-207ENST00000498466 KISS1RQ969F8 398 aaPredicted RBP12.4□□□□□ -0.42
CCDC58-207ENST00000498466 REXO5Q96IC2 774 aaKnown RBP12.4□□□□□ -0.42
CCDC58-207ENST00000498466 RNF145Q96MT1 663 aa12.4□□□□□ -0.42
CCDC58-207ENST00000498466 TNFRSF13CQ96RJ3 184 aa12.4□□□□□ -0.42
CCDC58-207ENST00000498466 DDX18Q9NVP1 670 aaKnown RBP12.4□□□□□ -0.42
CCDC58-207ENST00000498466 RNF14Q9UBS8 474 aa12.4□□□□□ -0.42
CCDC58-207ENST00000498466 LPAR3Q9UBY5 353 aa12.4□□□□□ -0.42
CCDC58-207ENST00000498466 NFU1Q9UMS0 254 aa12.4□□□□□ -0.42
CCDC58-207ENST00000498466 C19orf53Q9UNZ5 99 aaPredicted RBP12.4□□□□□ -0.42
CCDC58-207ENST00000498466 A0A0J9YW62 118 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 DPRXA6NFQ7 191 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 MANBAO00462 879 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 RAD51CO43502 376 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 KCNH1O95259 989 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 ADAP00813 363 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 KRT6AP02538 564 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 KRT6BP04259 564 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 PABPC4LP0CB38 370 aaKnown RBP12.39□□□□□ -0.43
CCDC58-207ENST00000498466 CHN1P15882 459 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 PTNP21246 168 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 KRT6CP48668 564 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 C21orf58P58505 322 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 GNG11P61952 73 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 ACSM2AQ08AH3 577 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 GRAMD1BQ3KR37 738 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 SPIN4Q56A73 249 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 ACSM2BQ68CK6 577 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 NUFIP2Q7Z417 695 aaKnown RBP12.39□□□□□ -0.43
CCDC58-207ENST00000498466 DTX2Q86UW9 622 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 CDC26Q8NHZ8 85 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 PIWIL2Q8TC59 973 aaKnown RBP12.39□□□□□ -0.43
CCDC58-207ENST00000498466 FBXO25Q8TCJ0 367 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 ABHD3Q8WU67 409 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 ROBO4Q8WZ75 1007 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 OSTF1Q92882 214 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 ZBTB8AQ96BR9 441 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 APIPQ96GX9 242 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 ADAD1Q96M93 576 aaKnown RBP12.39□□□□□ -0.43
CCDC58-207ENST00000498466 NPAS1Q99742 590 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 NAPGQ99747 312 aaPredicted RBP12.39□□□□□ -0.43
CCDC58-207ENST00000498466 EBPLQ9BY08 206 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 POTEKPQ9BYX7 375 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 SHCBP1LQ9BZQ2 653 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 SHARPINQ9H0F6 387 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 C3orf14Q9HBI5 128 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 TMEM160Q9NX00 188 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 ZNF225Q9UK10 706 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 B3GALT5Q9Y2C3 310 aa12.39□□□□□ -0.43
CCDC58-207ENST00000498466 A0A096LNT2 108 aa12.38□□□□□ -0.43
CCDC58-207ENST00000498466 A0A1W2PRB8 838 aa12.38□□□□□ -0.43
CCDC58-207ENST00000498466 MYO1GB0I1T2 1018 aa12.38□□□□□ -0.43
CCDC58-207ENST00000498466 UPK1AO00322 258 aa12.38□□□□□ -0.43
CCDC58-207ENST00000498466 RAMP1O60894 148 aa12.38□□□□□ -0.43
CCDC58-207ENST00000498466 SLITRK5O94991 958 aa12.38□□□□□ -0.43
CCDC58-207ENST00000498466 TIA1P31483 386 aaKnown RBP eCLIP12.38□□□□□ -0.43
CCDC58-207ENST00000498466 GABRA3P34903 492 aa12.38□□□□□ -0.43
CCDC58-207ENST00000498466 ZNF41P51814 821 aaPredicted RBP12.38□□□□□ -0.43
CCDC58-207ENST00000498466 CDH11P55287 796 aa12.38□□□□□ -0.43
CCDC58-207ENST00000498466 CARD18P57730 90 aa12.38□□□□□ -0.43
CCDC58-207ENST00000498466 DSCR9P59020 149 aa12.38□□□□□ -0.43
CCDC58-207ENST00000498466 VLDLRP98155 873 aa12.38□□□□□ -0.43
CCDC58-207ENST00000498466 SRSF2Q01130 221 aaKnown RBP12.38□□□□□ -0.43
CCDC58-207ENST00000498466 CAV1Q03135 178 aa12.38□□□□□ -0.43
CCDC58-207ENST00000498466 RNPS1Q15287 305 aaKnown RBP12.38□□□□□ -0.43
CCDC58-207ENST00000498466 STK11Q15831 433 aa12.38□□□□□ -0.43
CCDC58-207ENST00000498466 TSNAXIP1Q2TAA8 658 aa12.38□□□□□ -0.43
CCDC58-207ENST00000498466 CPTPQ5TA50 214 aa12.38□□□□□ -0.43
CCDC58-207ENST00000498466 AGAP6Q5VW22 663 aa12.38□□□□□ -0.43
CCDC58-207ENST00000498466 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.38□□□□□ -0.43
CCDC58-207ENST00000498466 TUSC5Q8IXB3 177 aa12.38□□□□□ -0.43
CCDC58-207ENST00000498466 GATSQ8NAP1 163 aa12.38□□□□□ -0.43
CCDC58-207ENST00000498466 OR10H5Q8NGA6 315 aa12.38□□□□□ -0.43
CCDC58-207ENST00000498466 RNF128Q8TEB7 428 aa12.38□□□□□ -0.43
CCDC58-207ENST00000498466 KLHL15Q96M94 604 aa12.38□□□□□ -0.43
CCDC58-207ENST00000498466 USB1Q9BQ65 265 aaKnown RBP12.38□□□□□ -0.43
CCDC58-207ENST00000498466 ACPTQ9BZG2 426 aa12.38□□□□□ -0.43
CCDC58-207ENST00000498466 GRIP2Q9C0E4 1043 aa12.38□□□□□ -0.43
CCDC58-207ENST00000498466 MED17Q9NVC6 651 aa12.38□□□□□ -0.43
CCDC58-207ENST00000498466 KLHL13Q9P2N7 655 aa12.38□□□□□ -0.43
CCDC58-207ENST00000498466 UTP11Q9Y3A2 253 aaKnown RBP12.38□□□□□ -0.43
CCDC58-207ENST00000498466 GXYLT2A0PJZ3 443 aa12.37□□□□□ -0.43
CCDC58-207ENST00000498466 C7orf72A4D263 438 aa12.37□□□□□ -0.43
CCDC58-207ENST00000498466 UBFD1O14562 309 aaKnown RBP12.37□□□□□ -0.43
CCDC58-207ENST00000498466 ULK1O75385 1050 aa12.37□□□□□ -0.43
CCDC58-207ENST00000498466 PSMG1O95456 288 aa12.37□□□□□ -0.43
CCDC58-207ENST00000498466 IGKV1D-16P01601 117 aa12.37□□□□□ -0.43
CCDC58-207ENST00000498466 ANXA4P09525 319 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms