RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 NPIPA7E9PJI5 369 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 SCDO00767 359 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 HNRNPCL1O60812 293 aaKnown RBP18.34■□□□□ 0.53
CTSD-206ENST00000497544 CHRM4P08173 479 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 NPIPA8P0DM63 369 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 HNRNPCL4P0DMR1 293 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 TBXA2RP21731 343 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 EVI2BP34910 448 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 DCTP40126 519 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 KCNJ2P63252 427 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 SNTA1Q13424 505 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 SCARB2Q14108 478 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 TYW3Q6IPR3 259 aaKnown RBP18.34■□□□□ 0.53
CTSD-206ENST00000497544 REEP3Q6NUK4 255 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 NET1Q7Z628 596 aaPredicted RBP18.34■□□□□ 0.53
CTSD-206ENST00000497544 IFNEQ86WN2 208 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 SULF2Q8IWU5 870 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 FBXO27Q8NI29 283 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 PMM1Q92871 262 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 MIB2Q96AX9 1013 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 ZNF583Q96ND8 569 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 FAM173AQ9BQD7 235 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 DOHHQ9BU89 302 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 OSBPL11Q9BXB4 747 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 ANGPTL4Q9BY76 406 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 TBL1XR1Q9BZK7 514 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 SAP130Q9H0E3 1048 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 SLC38A1Q9H2H9 487 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 SPAG4Q9NPE6 437 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 SDHAF3Q9NRP4 125 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.34■□□□□ 0.53
CTSD-206ENST00000497544 ANAPC2Q9UJX6 822 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 PCDHGA10Q9Y5H3 936 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 G3V3Y1 287 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 EBAG9O00559 213 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 FADS1O60427 444 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 SNX4O95219 450 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 OXSR1O95747 527 aaPredicted RBP18.33■□□□□ 0.52
CTSD-206ENST00000497544 NGFRP08138 427 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 GZMMP51124 257 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 EEFSECP57772 596 aaKnown RBP18.33■□□□□ 0.52
CTSD-206ENST00000497544 GPR85P60893 370 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 LIPEQ05469 1076 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 BNIP1Q12981 228 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 ADRM1Q16186 407 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 PRAMEF8Q5VWM4 474 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 PRAMEF7Q5VXH5 474 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 BICRALQ6AI39 1079 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 RPUSD3Q6P087 351 aaKnown RBP18.33■□□□□ 0.52
CTSD-206ENST00000497544 ERICH5Q6P6B1 374 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 FRRS1Q6ZNA5 592 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 RINLQ6ZS11 566 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 PACS2Q86VP3 889 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 CALHM3Q86XJ0 350 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 PTOV1Q86YD1 416 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 SLC30A8Q8IWU4 369 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 ZZZ3Q8IYH5 903 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 DEFB107AQ8IZN7 70 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 ZNF614Q8N883 585 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 RBM15BQ8NDT2 890 aaKnown RBP18.33■□□□□ 0.52
CTSD-206ENST00000497544 HIPK4Q8NE63 616 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 GRHL3Q8TE85 626 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 CDRT15Q96T59 188 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 RUBCNLQ9H714 662 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 CACYBPQ9HB71 228 aaKnown RBP18.33■□□□□ 0.52
CTSD-206ENST00000497544 ABCG2Q9UNQ0 655 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 ANGPT4Q9Y264 503 aa18.33■□□□□ 0.52
CTSD-206ENST00000497544 C2orf72A6NCS6 295 aa18.32■□□□□ 0.52
CTSD-206ENST00000497544 NME4O00746 187 aa18.32■□□□□ 0.52
CTSD-206ENST00000497544 NDUFB5O43674 189 aa18.32■□□□□ 0.52
CTSD-206ENST00000497544 SCO2O43819 266 aa18.32■□□□□ 0.52
CTSD-206ENST00000497544 ATP5HO75947 161 aa18.32■□□□□ 0.52
CTSD-206ENST00000497544 RASAL1O95294 804 aa18.32■□□□□ 0.52
CTSD-206ENST00000497544 PGM3O95394 542 aa18.32■□□□□ 0.52
CTSD-206ENST00000497544 DNASE1L1P49184 302 aa18.32■□□□□ 0.52
CTSD-206ENST00000497544 MAPK11Q15759 364 aa18.32■□□□□ 0.52
CTSD-206ENST00000497544 VMACQ2NL98 169 aa18.32■□□□□ 0.52
CTSD-206ENST00000497544 AP1ARQ63HQ0 302 aa18.32■□□□□ 0.52
CTSD-206ENST00000497544 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.32■□□□□ 0.52
CTSD-206ENST00000497544 MARCH3Q86UD3 253 aa18.32■□□□□ 0.52
CTSD-206ENST00000497544 PEX5LQ8IYB4 626 aa18.32■□□□□ 0.52
CTSD-206ENST00000497544 OR2T12Q8NG77 320 aa18.32■□□□□ 0.52
CTSD-206ENST00000497544 OR2M7Q8NG81 312 aa18.32■□□□□ 0.52
CTSD-206ENST00000497544 BBS10Q8TAM1 723 aa18.32■□□□□ 0.52
CTSD-206ENST00000497544 REXO5Q96IC2 774 aaKnown RBP18.32■□□□□ 0.52
CTSD-206ENST00000497544 JSRP1Q96MG2 331 aaPredicted RBP18.32■□□□□ 0.52
CTSD-206ENST00000497544 TREX2Q9BQ50 279 aaPredicted RBP18.32■□□□□ 0.52
CTSD-206ENST00000497544 C1orf21Q9H246 121 aa18.32■□□□□ 0.52
CTSD-206ENST00000497544 BCL2L10Q9HD36 194 aa18.32■□□□□ 0.52
CTSD-206ENST00000497544 DEPPQ9NTK1 212 aa18.32■□□□□ 0.52
CTSD-206ENST00000497544 LUZP4Q9P127 313 aa18.32■□□□□ 0.52
CTSD-206ENST00000497544 TMEM181Q9P2C4 612 aa18.32■□□□□ 0.52
CTSD-206ENST00000497544 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.32■□□□□ 0.52
CTSD-206ENST00000497544 F8P00451 2351 aa18.31■□□□□ 0.52
CTSD-206ENST00000497544 FAM220BPB1ANY3 271 aa18.31■□□□□ 0.52
CTSD-206ENST00000497544 ALG1L2C9J202 215 aa18.31■□□□□ 0.52
CTSD-206ENST00000497544 NPIPB9F8W1W9 429 aa18.31■□□□□ 0.52
CTSD-206ENST00000497544 H3BNH8 94 aa18.31■□□□□ 0.52
CTSD-206ENST00000497544 KIAA0513O60268 411 aa18.31■□□□□ 0.52
CTSD-206ENST00000497544 UGT2B17O75795 530 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms