RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 AKAP3O75969 853 aa3.7□□□□□ -1.82
MDM2-220ENST00000496959 ODC1P11926 461 aa3.7□□□□□ -1.82
MDM2-220ENST00000496959 PGAM2P15259 253 aa3.7□□□□□ -1.82
MDM2-220ENST00000496959 GCFC2P16383 781 aaKnown RBP3.7□□□□□ -1.82
MDM2-220ENST00000496959 GDF1P27539 372 aa3.7□□□□□ -1.82
MDM2-220ENST00000496959 HOXA6P31267 233 aa3.7□□□□□ -1.82
MDM2-220ENST00000496959 QARSP47897 775 aaKnown RBP3.7□□□□□ -1.82
MDM2-220ENST00000496959 CXCL12P48061 93 aa3.7□□□□□ -1.82
MDM2-220ENST00000496959 RPL27P61353 136 aaKnown RBP3.7□□□□□ -1.82
MDM2-220ENST00000496959 KARSQ15046 597 aaKnown RBP3.7□□□□□ -1.82
MDM2-220ENST00000496959 PPP1R3AQ16821 1122 aa3.7□□□□□ -1.82
MDM2-220ENST00000496959 KLHL7Q8IXQ5 586 aa3.7□□□□□ -1.82
MDM2-220ENST00000496959 CCDC26Q8TAB7 109 aa3.7□□□□□ -1.82
MDM2-220ENST00000496959 EXOC6Q8TAG9 804 aa3.7□□□□□ -1.82
MDM2-220ENST00000496959 CRYGNQ8WXF5 182 aa3.7□□□□□ -1.82
MDM2-220ENST00000496959 FGF13Q92913 245 aa3.7□□□□□ -1.82
MDM2-220ENST00000496959 ZNF707Q96C28 371 aaPredicted RBP3.7□□□□□ -1.82
MDM2-220ENST00000496959 CCDC43Q96MW1 224 aaKnown RBP3.7□□□□□ -1.82
MDM2-220ENST00000496959 CUEDC2Q9H467 287 aa3.7□□□□□ -1.82
MDM2-220ENST00000496959 C8orf33Q9H7E9 229 aaPredicted RBP3.7□□□□□ -1.82
MDM2-220ENST00000496959 ZFP14Q9HCL3 533 aa3.7□□□□□ -1.82
MDM2-220ENST00000496959 ZNF446Q9NWS9 450 aa3.7□□□□□ -1.82
MDM2-220ENST00000496959 MARCH5Q9NX47 278 aa3.7□□□□□ -1.82
MDM2-220ENST00000496959 EIF3KQ9UBQ5 218 aaKnown RBP3.7□□□□□ -1.82
MDM2-220ENST00000496959 PRG3Q9Y2Y8 225 aaPredicted RBP3.7□□□□□ -1.82
MDM2-220ENST00000496959 NID2Q14112 1375 aa3.7□□□□□ -1.82
MDM2-220ENST00000496959 TRIP11Q15643 1979 aa3.7□□□□□ -1.82
MDM2-220ENST00000496959 COL4A2P08572 1712 aa3.7□□□□□ -1.82
MDM2-220ENST00000496959 DCHS1Q96JQ0 3298 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 NOTCH2Q04721 2471 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 MAGEB16A2A368 324 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 ARL5CA6NH57 179 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 ST8SIA3O43173 380 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 CHMP2AO43633 222 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 PROS1P07225 676 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 PSMC3P17980 439 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 CHMLP26374 656 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 RDXP35241 583 aaKnown RBP3.69□□□□□ -1.82
MDM2-220ENST00000496959 PAX2Q02962 417 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 SCN1BQ07699 218 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 MFGE8Q08431 387 aaPredicted RBP3.69□□□□□ -1.82
MDM2-220ENST00000496959 PLD1Q13393 1074 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 PSMD5Q16401 504 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 ACKR1Q16570 336 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 ODF2Q5BJF6 829 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 AGAP6Q5VW22 663 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 PET117Q6UWS5 81 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 SIGLEC15Q6ZMC9 328 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 C17orf64Q86WR6 236 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 ZBTB8OSQ8IWT0 167 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 UXS1Q8NBZ7 420 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 GOLGA5Q8TBA6 731 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 VN1R17PQ8TDU5 208 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 FAM3CQ92520 227 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 FGF14Q92915 247 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 MRPL24Q96A35 216 aaKnown RBP3.69□□□□□ -1.82
MDM2-220ENST00000496959 PCED1BQ96HM7 432 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 CEP170P1Q96L14 293 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 ADPGKQ9BRR6 497 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 WWP1Q9H0M0 922 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 DHX33Q9H6R0 707 aaKnown RBP3.69□□□□□ -1.82
MDM2-220ENST00000496959 VPS18Q9P253 973 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 OR1A2Q9Y585 309 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 BAHCC1Q9P281 2608 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 MYH11P35749 1972 aa3.69□□□□□ -1.82
MDM2-220ENST00000496959 KIF26AQ9ULI4 1882 aaPredicted RBP3.69□□□□□ -1.82
MDM2-220ENST00000496959 DENND4CQ5VZ89 1909 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 ATP6AP2A0A1C7CYW4 349 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 CCT8L1PA6NM43 557 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 ZNF263O14978 683 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 MSH4O15457 936 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 LYPD3O95274 346 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 PRAMEF12O95522 483 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 PRB2P02812 416 aaPredicted RBP3.68□□□□□ -1.82
MDM2-220ENST00000496959 ZNF806P0C7X5 589 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 TDGF1P13385 188 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 GLRA1P23415 457 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 YWHABP31946 246 aaKnown RBP3.68□□□□□ -1.82
MDM2-220ENST00000496959 LAMTOR4Q0VGL1 99 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 PPP2R5CQ13362 524 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 KIAA0040Q15053 153 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 DCAF4L1Q3SXM0 396 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 TPGS2Q68CL5 300 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 CAVIN1Q6NZI2 390 aaKnown RBP3.68□□□□□ -1.82
MDM2-220ENST00000496959 RALGPS2Q86X27 583 aaPredicted RBP3.68□□□□□ -1.82
MDM2-220ENST00000496959 SPATA18Q8TC71 538 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 SMARCD2Q92925 531 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 CCT8L2Q96SF2 557 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 TTYH2Q9BSA4 534 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 C2orf40Q9H1Z8 148 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 MTRRQ9UBK8 725 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 NDRG2Q9UN36 371 aaKnown RBP3.68□□□□□ -1.82
MDM2-220ENST00000496959 PLEKHA6Q9Y2H5 1048 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 POMT1Q9Y6A1 747 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 PKD1L2Q7Z442 2459 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 PI4KAP42356 2102 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 USP24Q9UPU5 2620 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 PLXND1Q9Y4D7 1925 aa3.68□□□□□ -1.82
MDM2-220ENST00000496959 EML5Q05BV3 1969 aa3.67□□□□□ -1.82
MDM2-220ENST00000496959 THADAQ6YHU6 1953 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms