RNA–Protein interactions for RNA: ENST00000496809.5

VPS72-206, Transcript of vacuolar protein sorting 72 homolog, human

TSL 5

Gene VPS72, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS72-206	ENST00000496809	MKS1	Q9NXB0	559 aa		11.15	□□□□□ -0.62
VPS72-206	ENST00000496809	FLRT3	Q9NZU0	649 aa		11.15	□□□□□ -0.62
VPS72-206	ENST00000496809	MCTS1	Q9ULC4	181 aa	Known RBP	11.15	□□□□□ -0.62
VPS72-206	ENST00000496809	FIS1	Q9Y3D6	152 aa		11.15	□□□□□ -0.62
VPS72-206	ENST00000496809	DNAJC15	Q9Y5T4	150 aa		11.15	□□□□□ -0.62
VPS72-206	ENST00000496809	HRNR	Q86YZ3	2850 aa	Predicted RBP	11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	GXYLT2	A0PJZ3	443 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	C7orf72	A4D263	438 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	C17orf51	A8MQB3	221 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	EIF1AY	O14602	144 aa	Known RBP	11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	LSM1	O15116	133 aa	Known RBP	11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	NPHS1	O60500	1241 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	SYNGR4	O95473	234 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	OXSR1	O95747	527 aa	Predicted RBP	11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	CGA	P01215	116 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	PABPC4L	P0CB38	370 aa	Known RBP	11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	PPP3CB	P16298	524 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	CD53	P19397	219 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	CRYGS	P22914	178 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	EIF1	P41567	113 aa	Known RBP	11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	EIF1AX	P47813	144 aa	Known RBP	11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	RAC1	P63000	192 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	NKX6-1	P78426	367 aa	Predicted RBP	11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	TMEM44	Q2T9K0	475 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	GALNTL6	Q49A17	601 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	CPTP	Q5TA50	214 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	ZNF474	Q6S9Z5	364 aa	Predicted RBP	11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	BIVM	Q86UB2	503 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	EXOC3L1	Q86VI1	746 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	GSPT2	Q8IYD1	628 aa	Known RBP	11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	COX18	Q8N8Q8	333 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	ZNF527	Q8NB42	609 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	OR5M1	Q8NGP8	315 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	OR4C3	Q8NH37	302 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	FAM110B	Q8TC76	370 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	EPS8L3	Q8TE67	593 aa	Known RBP	11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	CIDEC	Q96AQ7	238 aa	Predicted RBP	11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	POM121	Q96HA1	1249 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	GMPPA	Q96IJ6	420 aa	Predicted RBP	11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	APOPT1	Q96IL0	206 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	C18orf12	Q96KH6	178 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	PPP3R2	Q96LZ3	170 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	PRPF18	Q99633	342 aa	Known RBP	11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	GATA5	Q9BWX5	397 aa	Predicted RBP	11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	HOXD1	Q9GZZ0	328 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	OPN3	Q9H1Y3	402 aa	Predicted RBP	11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	DLL4	Q9NR61	685 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	PLSCR4	Q9NRQ2	329 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	ATAD3A	Q9NVI7	634 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	GIN1	Q9NXP7	522 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	KLHL28	Q9NXS3	571 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	VDAC3	Q9Y277	283 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	TRAF6	Q9Y4K3	522 aa		11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	PRRC2A	P48634	2157 aa	Known RBP	11.14	□□□□□ -0.63
VPS72-206	ENST00000496809	ABCA4	P78363	2273 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809		A0A1W2PQD3	144 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	TLDC2	A0PJX2	215 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	FAM171A2	A8MVW0	826 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809		H0YC42	278 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809		H3BNH8	94 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	GMFG	O60234	142 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	SMPD2	O60906	423 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	KCNK2	O95069	426 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	IGKV1D-16	P01601	117 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	KRT16	P08779	473 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	BCKDHA	P12694	445 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	IL11	P20809	199 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	ATP6V1C1	P21283	382 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	SERPINB5	P36952	375 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	TPD52	P55327	224 aa	Predicted RBP	11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	POU6F2	P78424	691 aa	Predicted RBP	11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	PCLAF	Q15004	111 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	LSM12	Q3MHD2	195 aa	Known RBP	11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	ANKRD26P1	Q6NSI1	321 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	PPP4R4	Q6NUP7	873 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	MFSD12	Q6NUT3	480 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	APOOL	Q6UXV4	268 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	ESPNL	Q6ZVH7	1005 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	MTERF4	Q7Z6M4	381 aa	Known RBP	11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	GGN	Q86UU5	652 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	STK32C	Q86UX6	486 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	P3H2	Q8IVL5	708 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	LRRC75A-AS1	Q8N1F1	130 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	ZNF610	Q8N9Z0	462 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	SLC16A11	Q8NCK7	471 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	OR6K3	Q8NGY3	331 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	OR2T11	Q8NH01	316 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	TWIST2	Q8WVJ9	160 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	JADE3	Q92613	823 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	PIK3IP1	Q96FE7	263 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	CHMP6	Q96FZ7	201 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	REXO5	Q96IC2	774 aa	Known RBP	11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	STAC	Q99469	402 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	BTBD2	Q9BX70	525 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	C12orf65	Q9H3J6	166 aa	Known RBP	11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	TIGAR	Q9NQ88	270 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	DUSP22	Q9NRW4	184 aa		11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	ZCCHC3	Q9NUD5	404 aa	Known RBP	11.13	□□□□□ -0.63
VPS72-206	ENST00000496809	BAIAP2L1	Q9UHR4	511 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms