RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 CARD8Q9Y2G2 431 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 CEP192Q8TEP8 1941 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 KRBA1A5PL33 1030 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 SLC9B1P1A6NJY1 282 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 ZNF670-ZNF695F2Z2N8 137 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 APOL3O95236 402 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 CH25HO95992 272 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 CTSBP07858 339 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 GKN3PP0CG01 181 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 CPEP16870 476 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 IGFBP4P22692 258 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 TGM1P22735 817 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 CRYBB2P43320 205 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 CAPZBP47756 277 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 GCGRP47871 477 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 ELOCQ15369 112 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 OR1Q1Q15612 314 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 ZNF181Q2M3W8 571 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 PRTGQ2VWP7 1150 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 LIPKQ5VXJ0 399 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 DGAT2L6Q6ZPD8 337 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 MCATQ8IVS2 390 aaKnown RBP12.11□□□□□ -0.47
GARNL3-220ENST00000496711 RBCK1Q9BYM8 510 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 NUAK2Q9H093 628 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 EVA1AQ9H8M9 152 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 C14orf105Q9NVL8 296 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 KLHL3Q9UH77 587 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 ZNF223Q9UK11 482 aaPredicted RBP12.11□□□□□ -0.47
GARNL3-220ENST00000496711 SSR3Q9UNL2 185 aa12.11□□□□□ -0.47
GARNL3-220ENST00000496711 A0A075B6Q4 140 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 A0A0A6YYC8 382 aaPredicted RBP12.1□□□□□ -0.47
GARNL3-220ENST00000496711 UNC119BA6NIH7 251 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 I3L1I5 382 aaPredicted RBP12.1□□□□□ -0.47
GARNL3-220ENST00000496711 CDC42EP2O14613 210 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 SOX30O94993 753 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 LYPD3O95274 346 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 MED26O95402 600 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 HMGN1P05114 100 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 RNH1P13489 461 aaKnown RBP12.1□□□□□ -0.47
GARNL3-220ENST00000496711 PTNP21246 168 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 BMP8BP34820 402 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 FASLGP48023 281 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 AADACL4Q5VUY2 407 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 WDR88Q6ZMY6 472 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 RNF113BQ8IZP6 322 aaKnown RBP12.1□□□□□ -0.47
GARNL3-220ENST00000496711 FANK1Q8TC84 345 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 BRIX1Q8TDN6 353 aaKnown RBP12.1□□□□□ -0.47
GARNL3-220ENST00000496711 TMEM239Q8WW34 195 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 LMF2Q9BU23 707 aaKnown RBP12.1□□□□□ -0.47
GARNL3-220ENST00000496711 PHF7Q9BWX1 381 aaPredicted RBP12.1□□□□□ -0.47
GARNL3-220ENST00000496711 ISYNA1Q9NPH2 558 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 HCN3Q9P1Z3 774 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 CRNNQ9UBG3 495 aaPredicted RBP12.1□□□□□ -0.47
GARNL3-220ENST00000496711 FBXL21Q9UKT6 434 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 MRPS33Q9Y291 106 aaKnown RBP12.1□□□□□ -0.47
GARNL3-220ENST00000496711 SPIN1Q9Y657 262 aaPredicted RBP12.1□□□□□ -0.47
GARNL3-220ENST00000496711 SPTBN5Q9NRC6 3674 aaKnown RBP12.1□□□□□ -0.47
GARNL3-220ENST00000496711 ISPDA4D126 451 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 BLACEA4D250 179 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 WWP2O00308 870 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 SRPX2O60687 465 aaPredicted RBP12.1□□□□□ -0.47
GARNL3-220ENST00000496711 KCNK2O95069 426 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 CSF2P04141 144 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 TSPAN19P0C672 248 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 NME1P15531 152 aaKnown RBP12.1□□□□□ -0.47
GARNL3-220ENST00000496711 ETV6P41212 452 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 RNF144AP50876 292 aaPredicted RBP12.1□□□□□ -0.47
GARNL3-220ENST00000496711 BNC1Q01954 994 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 SLC13A2Q13183 592 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 ZNHIT3Q15649 155 aaPredicted RBP12.1□□□□□ -0.47
GARNL3-220ENST00000496711 FLYWCH1Q4VC44 716 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 OR2G6Q5TZ20 316 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 NXNL2Q5VZ03 156 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 GKN2Q86XP6 184 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 ARL14Q8N4G2 192 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 PARP16Q8N5Y8 322 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 OR52L1Q8NGH7 329 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 ADAMTS18Q8TE60 1221 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 TRMT61AQ96FX7 289 aaKnown RBP12.1□□□□□ -0.47
GARNL3-220ENST00000496711 TCTN2Q96GX1 697 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 SAMD8Q96LT4 415 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 NELL2Q99435 816 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 ZNF559Q9BR84 538 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 DPH1Q9BZG8 443 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 OR52D1Q9H346 318 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 UCK1Q9HA47 277 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 SIAEQ9HAT2 523 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 FOLH1BQ9HBA9 442 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 CAPN10Q9HC96 672 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 SMURF1Q9HCE7 757 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 ABCB10Q9NRK6 738 aa12.1□□□□□ -0.47
GARNL3-220ENST00000496711 PNMA8CA0A1B0GUJ8 204 aa12.09□□□□□ -0.47
GARNL3-220ENST00000496711 LILRA5A6NI73 299 aa12.09□□□□□ -0.47
GARNL3-220ENST00000496711 STK25O00506 426 aa12.09□□□□□ -0.47
GARNL3-220ENST00000496711 TBX1O43435 398 aa12.09□□□□□ -0.47
GARNL3-220ENST00000496711 WNT1P04628 370 aa12.09□□□□□ -0.47
GARNL3-220ENST00000496711 PROS1P07225 676 aa12.09□□□□□ -0.47
GARNL3-220ENST00000496711 GUSBP08236 651 aa12.09□□□□□ -0.47
GARNL3-220ENST00000496711 IFI30P13284 250 aa12.09□□□□□ -0.47
GARNL3-220ENST00000496711 POU3F3P20264 500 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms