RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 UGT2B17O75795 530 aa16.79■□□□□ 0.28
TSSC4-210ENST00000496468 PDE9AO76083 593 aa16.79■□□□□ 0.28
TSSC4-210ENST00000496468 RPS4Y1P22090 263 aaKnown RBP16.79■□□□□ 0.28
TSSC4-210ENST00000496468 PTGDSP41222 190 aa16.79■□□□□ 0.28
TSSC4-210ENST00000496468 MASP1P48740 699 aa16.79■□□□□ 0.28
TSSC4-210ENST00000496468 DNASE1L1P49184 302 aa16.79■□□□□ 0.28
TSSC4-210ENST00000496468 ZNF141Q15928 474 aa16.79■□□□□ 0.28
TSSC4-210ENST00000496468 INAQ16352 499 aa16.79■□□□□ 0.28
TSSC4-210ENST00000496468 LIN52Q52LA3 116 aa16.79■□□□□ 0.28
TSSC4-210ENST00000496468 HMGN2P46Q86SG4 172 aa16.79■□□□□ 0.28
TSSC4-210ENST00000496468 ARHGAP24Q8N264 748 aa16.79■□□□□ 0.28
TSSC4-210ENST00000496468 GATSQ8NAP1 163 aa16.79■□□□□ 0.28
TSSC4-210ENST00000496468 OR2M7Q8NG81 312 aa16.79■□□□□ 0.28
TSSC4-210ENST00000496468 WDR60Q8WVS4 1066 aa16.79■□□□□ 0.28
TSSC4-210ENST00000496468 PMM1Q92871 262 aa16.79■□□□□ 0.28
TSSC4-210ENST00000496468 SLC7A6OSQ96CW6 309 aaPredicted RBP16.79■□□□□ 0.28
TSSC4-210ENST00000496468 ZNF607Q96SK3 696 aa16.79■□□□□ 0.28
TSSC4-210ENST00000496468 FAM173AQ9BQD7 235 aa16.79■□□□□ 0.28
TSSC4-210ENST00000496468 BTBD10Q9BSF8 475 aa16.79■□□□□ 0.28
TSSC4-210ENST00000496468 MTHFD2LQ9H903 347 aaPredicted RBP16.79■□□□□ 0.28
TSSC4-210ENST00000496468 DEPPQ9NTK1 212 aa16.79■□□□□ 0.28
TSSC4-210ENST00000496468 DTNAQ9Y4J8 743 aa16.79■□□□□ 0.28
TSSC4-210ENST00000496468 AGAP5A6NIR3 686 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 KLRC4-KLRK1H3BQV0 150 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 GSTA4O15217 222 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 NDUFB5O43674 189 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 PEX1O43933 1283 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 SNX4O95219 450 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 ANGPTL1O95841 491 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 DBIP07108 87 aaKnown RBP16.78■□□□□ 0.28
TSSC4-210ENST00000496468 HSD17B1P14061 328 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 ETS2P15036 469 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 CNR1P21554 472 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 MEOX1P50221 254 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 RNF144AP50876 292 aaPredicted RBP16.78■□□□□ 0.28
TSSC4-210ENST00000496468 PCBP3P57721 371 aaKnown RBP16.78■□□□□ 0.28
TSSC4-210ENST00000496468 KLRB1Q12918 225 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 VEZF1Q14119 521 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 SPATS1Q496A3 300 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 MARCH3Q86UD3 253 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 PACS2Q86VP3 889 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 MISPQ8IVT2 679 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 SULF2Q8IWU5 870 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 TEX19Q8NA77 164 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 TMEM41AQ96HV5 264 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 JSRP1Q96MG2 331 aaPredicted RBP16.78■□□□□ 0.28
TSSC4-210ENST00000496468 SPATA5L1Q9BVQ7 753 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 PROK2Q9HC23 129 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 LUZP4Q9P127 313 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 PPP4R1LQ9P1A2 415 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 KCNE5Q9UJ90 142 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 BOKQ9UMX3 212 aaPredicted RBP16.78■□□□□ 0.28
TSSC4-210ENST00000496468 ZNF443Q9Y2A4 671 aaPredicted RBP16.78■□□□□ 0.28
TSSC4-210ENST00000496468 BOD1L1Q8NFC6 3051 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 EPG5Q9HCE0 2579 aa16.78■□□□□ 0.28
TSSC4-210ENST00000496468 ATXN7O15265 892 aaPredicted RBP16.77■□□□□ 0.28
TSSC4-210ENST00000496468 PDE5AO76074 875 aa16.77■□□□□ 0.28
TSSC4-210ENST00000496468 THBS1P07996 1170 aa16.77■□□□□ 0.28
TSSC4-210ENST00000496468 NID1P14543 1247 aa16.77■□□□□ 0.28
TSSC4-210ENST00000496468 TCN1P20061 433 aaPredicted RBP16.77■□□□□ 0.28
TSSC4-210ENST00000496468 GAS1P54826 345 aa16.77■□□□□ 0.28
TSSC4-210ENST00000496468 NCALDP61601 193 aa16.77■□□□□ 0.28
TSSC4-210ENST00000496468 FGFBP1Q14512 234 aa16.77■□□□□ 0.28
TSSC4-210ENST00000496468 CD226Q15762 336 aa16.77■□□□□ 0.28
TSSC4-210ENST00000496468 MAPK14Q16539 360 aa16.77■□□□□ 0.28
TSSC4-210ENST00000496468 LRRC23Q53EV4 343 aaPredicted RBP16.77■□□□□ 0.28
TSSC4-210ENST00000496468 KLHL26Q53HC5 615 aa16.77■□□□□ 0.28
TSSC4-210ENST00000496468 AP1ARQ63HQ0 302 aa16.77■□□□□ 0.28
TSSC4-210ENST00000496468 APOOLQ6UXV4 268 aa16.77■□□□□ 0.28
TSSC4-210ENST00000496468 PATL1Q86TB9 770 aaKnown RBP16.77■□□□□ 0.28
TSSC4-210ENST00000496468 FAM156AQ8NDB6 213 aa16.77■□□□□ 0.28
TSSC4-210ENST00000496468 OR52P1PQ8NH57 321 aa16.77■□□□□ 0.28
TSSC4-210ENST00000496468 PHOSPHO1Q8TCT1 267 aa16.77■□□□□ 0.28
TSSC4-210ENST00000496468 FIG4Q92562 907 aa16.77■□□□□ 0.28
TSSC4-210ENST00000496468 LRMDAQ9H2I8 198 aa16.77■□□□□ 0.28
TSSC4-210ENST00000496468 HHATLQ9HCP6 504 aa16.77■□□□□ 0.28
TSSC4-210ENST00000496468 SDHAF3Q9NRP4 125 aa16.77■□□□□ 0.28
TSSC4-210ENST00000496468 IFT52Q9Y366 437 aa16.77■□□□□ 0.28
TSSC4-210ENST00000496468 GPC6Q9Y625 555 aaPredicted RBP16.77■□□□□ 0.28
TSSC4-210ENST00000496468 NBEAQ8NFP9 2946 aa16.76■□□□□ 0.27
TSSC4-210ENST00000496468 PINLYPA6NC86 204 aa16.76■□□□□ 0.27
TSSC4-210ENST00000496468 C2orf72A6NCS6 295 aa16.76■□□□□ 0.27
TSSC4-210ENST00000496468 SERINC4A6NH21 518 aa16.76■□□□□ 0.27
TSSC4-210ENST00000496468 CXCR6O00574 342 aa16.76■□□□□ 0.27
TSSC4-210ENST00000496468 SNPHO15079 494 aa16.76■□□□□ 0.27
TSSC4-210ENST00000496468 TRIM3O75382 744 aaPredicted RBP16.76■□□□□ 0.27
TSSC4-210ENST00000496468 SERPINB7O75635 380 aa16.76■□□□□ 0.27
TSSC4-210ENST00000496468 DNAJC8O75937 253 aaPredicted RBP16.76■□□□□ 0.27
TSSC4-210ENST00000496468 RASAL1O95294 804 aa16.76■□□□□ 0.27
TSSC4-210ENST00000496468 PABPC4LP0CB38 370 aaKnown RBP16.76■□□□□ 0.27
TSSC4-210ENST00000496468 UBL4AP11441 157 aa16.76■□□□□ 0.27
TSSC4-210ENST00000496468 IL7RP16871 459 aa16.76■□□□□ 0.27
TSSC4-210ENST00000496468 ENDOUP21128 410 aaKnown RBP16.76■□□□□ 0.27
TSSC4-210ENST00000496468 ELAVL4P26378 380 aaKnown RBP16.76■□□□□ 0.27
TSSC4-210ENST00000496468 HTR1EP28566 365 aa16.76■□□□□ 0.27
TSSC4-210ENST00000496468 PMP22Q01453 160 aa16.76■□□□□ 0.27
TSSC4-210ENST00000496468 PLGLB1Q02325 96 aa16.76■□□□□ 0.27
TSSC4-210ENST00000496468 CEACAM7Q14002 265 aa16.76■□□□□ 0.27
TSSC4-210ENST00000496468 LARS2Q15031 903 aaKnown RBP16.76■□□□□ 0.27
TSSC4-210ENST00000496468 EIF3MQ7L2H7 374 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms