RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 ZNF253O75346 499 aa4.22□□□□□ -1.73
SSR3-208ENST00000496050 B3GAT3O94766 335 aa4.22□□□□□ -1.73
SSR3-208ENST00000496050 PGAM2P15259 253 aa4.22□□□□□ -1.73
SSR3-208ENST00000496050 GATA1P15976 413 aaPredicted RBP4.22□□□□□ -1.73
SSR3-208ENST00000496050 NT5EP21589 574 aa4.22□□□□□ -1.73
SSR3-208ENST00000496050 MAGEA9P43362 315 aa4.22□□□□□ -1.73
SSR3-208ENST00000496050 RGS4P49798 205 aa4.22□□□□□ -1.73
SSR3-208ENST00000496050 CBX1P83916 185 aa4.22□□□□□ -1.73
SSR3-208ENST00000496050 PAX2Q02962 417 aa4.22□□□□□ -1.73
SSR3-208ENST00000496050 KCNJ11Q14654 390 aa4.22□□□□□ -1.73
SSR3-208ENST00000496050 LPAL2Q16609 132 aa4.22□□□□□ -1.73
SSR3-208ENST00000496050 ZNF57Q68EA5 555 aaPredicted RBP4.22□□□□□ -1.73
SSR3-208ENST00000496050 GCNT7Q6ZNI0 430 aa4.22□□□□□ -1.73
SSR3-208ENST00000496050 SERINC5Q86VE9 423 aa4.22□□□□□ -1.73
SSR3-208ENST00000496050 MCOLN2Q8IZK6 566 aa4.22□□□□□ -1.73
SSR3-208ENST00000496050 SPEM1Q8N4L4 309 aa4.22□□□□□ -1.73
SSR3-208ENST00000496050 CSNK1A1LQ8N752 337 aa4.22□□□□□ -1.73
SSR3-208ENST00000496050 OSTF1Q92882 214 aa4.22□□□□□ -1.73
SSR3-208ENST00000496050 C1orf147Q96MC9 270 aaPredicted RBP4.22□□□□□ -1.73
SSR3-208ENST00000496050 CRACR2AQ9BSW2 395 aa4.22□□□□□ -1.73
SSR3-208ENST00000496050 NT5C3AQ9H0P0 336 aa4.22□□□□□ -1.73
SSR3-208ENST00000496050 DPM3Q9P2X0 92 aa4.22□□□□□ -1.73
SSR3-208ENST00000496050 RNF14Q9UBS8 474 aa4.22□□□□□ -1.73
SSR3-208ENST00000496050 CSAG2Q9Y5P2 127 aa4.22□□□□□ -1.73
SSR3-208ENST00000496050 POGZQ7Z3K3 1410 aa4.21□□□□□ -1.73
SSR3-208ENST00000496050 ESYT2A0FGR8 921 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 FAM220BPB1ANY3 271 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 SRRM5B3KS81 715 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 E9PLD3 99 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 K7EQM0 130 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 GPAA1O43292 621 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 ZSCAN12O43309 604 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 CRLF1O75462 422 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 TM7SF2O76062 418 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 SLC2A10O95528 541 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 UGT2B4P06133 528 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 CA8P35219 290 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 HNMTP50135 292 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 ZNF154Q13106 437 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 RUNX3Q13761 415 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 SYPL1Q16563 259 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 C15orf32Q32M92 178 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 EIPR1Q53HC9 387 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 SPATA46Q5T0L3 261 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 APTXQ7Z2E3 356 aaKnown RBP4.21□□□□□ -1.74
SSR3-208ENST00000496050 ACOT1Q86TX2 421 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 OR2T3Q8NH03 318 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 TRMT10AQ8TBZ6 339 aaKnown RBP4.21□□□□□ -1.74
SSR3-208ENST00000496050 ZNF607Q96SK3 696 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 GLT8D2Q9H1C3 349 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 AIPL1Q9NZN9 384 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 C6orf203Q9P0P8 240 aaPredicted RBP4.21□□□□□ -1.74
SSR3-208ENST00000496050 GNG12Q9UBI6 72 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 EXTL2Q9UBQ6 330 aa4.21□□□□□ -1.74
SSR3-208ENST00000496050 C15orf38-AP3S2A0A0A6YYH1 394 aa4.2□□□□□ -1.74
SSR3-208ENST00000496050 A0A1W2PNV4 684 aa4.2□□□□□ -1.74
SSR3-208ENST00000496050 MBLAC1A4D2B0 266 aaPredicted RBP4.2□□□□□ -1.74
SSR3-208ENST00000496050 TPST2O60704 377 aa4.2□□□□□ -1.74
SSR3-208ENST00000496050 NOL4O94818 638 aa4.2□□□□□ -1.74
SSR3-208ENST00000496050 BDKRB1P46663 353 aa4.2□□□□□ -1.74
SSR3-208ENST00000496050 DHPSP49366 369 aaPredicted RBP4.2□□□□□ -1.74
SSR3-208ENST00000496050 PPT1P50897 306 aa4.2□□□□□ -1.74
SSR3-208ENST00000496050 ARFIP1P53367 373 aa4.2□□□□□ -1.74
SSR3-208ENST00000496050 RND3P61587 244 aa4.2□□□□□ -1.74
SSR3-208ENST00000496050 RPL8P62917 257 aaKnown RBP4.2□□□□□ -1.74
SSR3-208ENST00000496050 OTUD4Q01804 1114 aaKnown RBP4.2□□□□□ -1.74
SSR3-208ENST00000496050 RIPPLY1Q0D2K3 151 aa4.2□□□□□ -1.74
SSR3-208ENST00000496050 MESDQ14696 234 aa4.2□□□□□ -1.74
SSR3-208ENST00000496050 TIMM50Q3ZCQ8 353 aa4.2□□□□□ -1.74
SSR3-208ENST00000496050 C2orf66Q6UXQ4 117 aa4.2□□□□□ -1.74
SSR3-208ENST00000496050 VASH2Q86V25 355 aa4.2□□□□□ -1.74
SSR3-208ENST00000496050 MARCH9Q86YJ5 346 aa4.2□□□□□ -1.74
SSR3-208ENST00000496050 ADAMTS16Q8TE57 1224 aa4.2□□□□□ -1.74
SSR3-208ENST00000496050 CTNNBL1Q8WYA6 563 aaPredicted RBP4.2□□□□□ -1.74
SSR3-208ENST00000496050 C7orf34Q96L11 122 aa4.2□□□□□ -1.74
SSR3-208ENST00000496050 ZSCAN5AQ9BUG6 496 aa4.2□□□□□ -1.74
SSR3-208ENST00000496050 TM2D1Q9BX74 207 aa4.2□□□□□ -1.74
SSR3-208ENST00000496050 MEAF6Q9HAF1 191 aa4.2□□□□□ -1.74
SSR3-208ENST00000496050 ELOVL3Q9HB03 270 aa4.2□□□□□ -1.74
SSR3-208ENST00000496050 SLC2A6Q9UGQ3 507 aa4.2□□□□□ -1.74
SSR3-208ENST00000496050 SAMD4AQ9UPU9 718 aaKnown RBP4.2□□□□□ -1.74
SSR3-208ENST00000496050 MRPS33Q9Y291 106 aaKnown RBP4.2□□□□□ -1.74
SSR3-208ENST00000496050 L3MBTL1Q9Y468 752 aa4.2□□□□□ -1.74
SSR3-208ENST00000496050 MAD1L1Q9Y6D9 718 aa4.2□□□□□ -1.74
SSR3-208ENST00000496050 KDRP35968 1356 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 SAGE2PA6NJ88 616 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 NPIPA7E9PJI5 369 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 SPAG6O75602 509 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 NEBLO76041 1014 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 NPIPA8P0DM63 369 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 PGCP20142 388 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 TPSB2P20231 275 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 BCL3P20749 454 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 TBXA2RP21731 343 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 GLRA2P23416 452 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 PAX7P23759 505 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 NF2P35240 595 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 XCR1P46094 333 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 GBX2P52951 348 aaPredicted RBP4.19□□□□□ -1.74
SSR3-208ENST00000496050 AP3M2P53677 418 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms